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PLM4_5_b1_sep16_scaffold_3714

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3714_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3..626
DNA (624bp) protein (208aa)
PEGA domain protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
h16_A1272; hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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674..1603
DNA (930bp) protein (310aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1856..2590)
DNA (735bp) protein (245aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2898..4379
DNA (1482bp) protein (494aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4556..5740
DNA (1185bp) protein (395aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Arhodomonas aquaeolei genus=Arhodomonas taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_6

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6029..6730
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_499 RepID=L7VYG9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72481.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_499.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_3714_7

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6797..7492
DNA (696bp) protein (232aa)
Redoxin domain protein Tax=uncultured bacterium A1Q1_fos_499 RepID=L7W1M8_9BACT
Redoxin domain protein {ECO:0000313|EMBL:AGC72480.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_499.;"
redoxin domain-containing protein
PLM4_5_b1_sep16_scaffold_3714_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7497..11045)
DNA (3549bp) protein (1183aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.3.5 3.1.4.16)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11151..11963
DNA (813bp) protein (271aa)
Cytochrome c biogenesis factor Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDJ3_DESTA
cytochrome c biogenesis factor
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11993..12427
DNA (435bp) protein (145aa)
molybdenum cofactor sulfurase domain containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
MOSC domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_3714_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12445..12723
DNA (279bp) protein (93aa)
signal transduction histidine kinase, nitrogen specific, NtrB bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 11 items

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