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PLM4_5_b1_sep16_scaffold_2500

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2500_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2..1522
DNA (1521bp) protein (507aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
glycolate oxidase subunit glcD
Tax=CSP1_6_Rokubacteria
PLM4_5_b1_sep16_scaffold_2500_2
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1513..2739
DNA (1227bp) protein (409aa)
FAD linked oxidase-like protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABY34374.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM4_5_b1_sep16_scaffold_2500_3
unknown

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comp(2750..3412)
DNA (663bp) protein (221aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2500_4
unknown

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3548..4393
DNA (846bp) protein (282aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2500_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4404..5393
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCD4_MYXSD bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2500_6
unknown

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comp(5399..6409)
DNA (1011bp) protein (337aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2500_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(6409..6957)
DNA (549bp) protein (183aa)
id=24563984 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2500_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(6954..7526)
DNA (573bp) protein (191aa)
id=24563984 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2500_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7814..8398
DNA (585bp) protein (195aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
deoxyhypusine synthase-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 9 items

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