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PLM4_5_b1_sep16_scaffold_15234

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_15234_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..546
DNA (546bp) protein (182aa)
Fis family transcriptional regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sigma-54 dependent transcription regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_15234_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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675..1028
DNA (354bp) protein (118aa)
alias=16ft_combo_ws3_scaffold_2718_15 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_15234_3
unknown

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comp(1078..1659)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_15234_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1794..2045
DNA (252bp) protein (84aa)
alias=16ft_combo_ws3_scaffold_2718_11 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_15234_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2046..3680
DNA (1635bp) protein (545aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC5_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_15234_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3661..4455)
DNA (795bp) protein (265aa)
Dienelactone hydrolase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAS4_ANADF
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:ABS25820.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_5_b1_sep16_scaffold_15234_7
Yersinia bercovieri, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4539..5012)
DNA (474bp) protein (158aa)
isochorismatase hydrolase Tax=Maricaulis sp. JL2009 RepID=UPI0003A3A115
Isochorismatase family protein {ECO:0000313|EMBL:EEQ07133.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia bercovieri ATCC 43970.;"
isochorismatase family protein
PLM4_5_b1_sep16_scaffold_15234_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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5181..6590
DNA (1410bp) protein (470aa)
Oligoendopeptidase F bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
oligopeptidase F
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying 8 items

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