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PLM4_5_b1_sep16_scaffold_12389

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_12389_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YYK1_9BACT bin=16ft_combo_ws3_JS1 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(547..885)
DNA (339bp) protein (113aa)
Putative membrane protein Tax=Microcoleus sp. PCC 7113 RepID=K9WBA0_9CYAN bin=16ft_combo_ws3_JS1 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(882..2735)
DNA (1854bp) protein (618aa)
Methylenetetrahydrofolate reductase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L045_THERP bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_4
unknown

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2839..3777
DNA (939bp) protein (313aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_12389_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3774..4517
DNA (744bp) protein (248aa)
SpoIVB peptidase S55 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAX7_SINAD bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4555..5310
DNA (756bp) protein (252aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5307..6626
DNA (1320bp) protein (440aa)
YD repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QH4_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
YD repeat-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_12389_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6665..8185
DNA (1521bp) protein (507aa)
Putative uncharacterized protein Tax=Bacillus sp. SG-1 RepID=A6CKD2_9BACI bin=16ft_combo_ws3_JS1 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 8 items

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