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PLM4_32_b1_sep16_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_197_1
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..687)
DNA (687bp) protein (229aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Flavobacterium frigoris PS1 RepID=H7FS14_9FLAO
PLM4_32_b1_sep16_scaffold_197_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(746..1066)
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z1Z3_FLABF
Uncharacterized protein {ECO:0000313|EMBL:KFC61106.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_197_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1399..2310)
DNA (912bp) protein (304aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Flavobacterium frigoris PS1 RepID=H7FS17_9FLAO
PLM4_32_b1_sep16_scaffold_197_4
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2322..2954)
DNA (633bp) protein (211aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Flavobacterium sp. CF136 RepID=J2SNA6_9FLAO
PLM4_32_b1_sep16_scaffold_197_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3048..3827)
DNA (780bp) protein (260aa)
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:KFC61103.1}; EC=4.1.1.48 {ECO:0000313|EMBL:KFC61103.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase Tax=Flavobacterium sp. F52 RepID=J1KNE4_9FLAO
PLM4_32_b1_sep16_scaffold_197_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3909..4901)
DNA (993bp) protein (331aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Flavobacterium sp. CF136 RepID=J2JG75_9FLAO
PLM4_32_b1_sep16_scaffold_197_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4962..5528)
DNA (567bp) protein (189aa)
Anthranilate synthase Tax=Flavobacterium frigoris PS1 RepID=H7FS22_9FLAO
Anthranilate synthase subunit II {ECO:0000313|EMBL:KIA85665.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
glutamine amidotransferase of anthranilate synthase
PLM4_32_b1_sep16_scaffold_197_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5614..7014)
DNA (1401bp) protein (467aa)
trpE; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase, aminase component Tax=Flavobacterium frigoris PS1 RepID=H7FS23_9FLAO
Anthranilate synthase {ECO:0000313|EMBL:KFC61099.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_197_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7307..7873)
DNA (567bp) protein (189aa)
Lipid-binding protein {ECO:0000313|EMBL:KFC61098.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
YCE I like family protein bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
yceI; hypothetical protein
PLM4_32_b1_sep16_scaffold_197_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8157..9488)
DNA (1332bp) protein (444aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J3C9H8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61097.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_197_11
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9671..10240)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNQ1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28323.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_197_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10279..10911)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Flavobacterium cauense R2A-7 RepID=V6RXE4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61095.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
nitroreductase
PLM4_32_b1_sep16_scaffold_197_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10920..11375)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family Tax=Flavobacterium frigoris PS1 RepID=H7FS26_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFC61094.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
MarR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_197_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11573..12139)
DNA (567bp) protein (189aa)
Rhodanese-like domain protein Tax=Flavobacterium frigoris PS1 RepID=H7FS24_9FLAO
Lipid-binding protein {ECO:0000313|EMBL:KFC61096.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_197_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12187..12819)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Flavobacterium cauense R2A-7 RepID=V6RXE4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61095.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
nitroreductase
PLM4_32_b1_sep16_scaffold_197_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12828..13349)
DNA (522bp) protein (174aa)
Transcriptional regulator, MarR family Tax=Flavobacterium frigoris PS1 RepID=H7FS26_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFC61094.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
MarR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_197_17
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13563..14300)
DNA (738bp) protein (246aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00037B8EFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB42730.1}; species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
PLM4_32_b1_sep16_scaffold_197_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..15775)
DNA (1398bp) protein (466aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000345CCF6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_197_19
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15916..16524)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00036AF0CA
multiple antibiotic resistance MarC-related protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_32_b1_sep16_scaffold_197_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16867..20172
DNA (3306bp) protein (1102aa)
Histidine kinase {ECO:0000313|EMBL:KFC61092.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFC61092.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030C846F
multi-sensor hybrid histidine kinase
PLM4_32_b1_sep16_scaffold_197_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20273..20449)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61090.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_197_22
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20511..21728)
DNA (1218bp) protein (406aa)
ABC transporter permease Tax=Flavobacterium frigoris PS1 RepID=H7FTJ1_9FLAO
ABC transporter permease {ECO:0000313|EMBL:EIA08470.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
ybhR; ABC transporter permease
PLM4_32_b1_sep16_scaffold_197_23
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21942..23048)
DNA (1107bp) protein (369aa)
ABC-2 type transporter Tax=Flavobacterium frigoris PS1 RepID=H7FTJ2_9FLAO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
ybhS; ABC transporter permease
PLM4_32_b1_sep16_scaffold_197_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23208..23942)
DNA (735bp) protein (245aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Putative ABC transporter ATP-binding protein Tax=Flavobacterium frigoris PS1 RepID=H7FTJ3_9FLAO
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIA08472.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
PLM4_32_b1_sep16_scaffold_197_25
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24089..24985)
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08473.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
ybhF2; ABC transporter ATPase
PLM4_32_b1_sep16_scaffold_197_26
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25061..25936)
DNA (876bp) protein (292aa)
Putative ABC transport system, lipoprotein Tax=Flavobacterium frigoris PS1 RepID=H7FTJ6_9FLAO
Putative ABC transport system, lipoprotein {ECO:0000313|EMBL:EIA08475.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
ybhG; membrane fusion protein
PLM4_32_b1_sep16_scaffold_197_27
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25963..27222)
DNA (1260bp) protein (420aa)
Outer membrane efflux protein Tax=Flavobacterium frigoris PS1 RepID=H7FTJ7_9FLAO
Outer membrane efflux protein {ECO:0000313|EMBL:EIA08476.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
outer membrane efflux protein
PLM4_32_b1_sep16_scaffold_197_28
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27219..27812)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family Tax=Flavobacterium frigoris PS1 RepID=H7FTJ8_9FLAO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIA08477.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
TetR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_197_29
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27987..28181)
DNA (195bp) protein (65aa)
Conserved hypothetical membrane protein bin=GWA2_Flavobacterium_35_26 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Membrane protein {ECO:0000313|EMBL:KIA85672.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_197_30
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28178..28480)
DNA (303bp) protein (101aa)
Thioredoxin Tax=Flavobacterium frigoris PS1 RepID=H7FTJ9_9FLAO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
thioredoxin
Displaying items 1-30 of 45 in total

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