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PLM4_32_b1_sep16_scaffold_297

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_297_1
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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313..1482
DNA (1170bp) protein (390aa)
Zn-dependent dipeptidase, microsomal dipeptidase Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YT13_AEQSU
Zn-dependent dipeptidase, microsomal dipeptidase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
PLM4_32_b1_sep16_scaffold_297_2
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1644..1961)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SIG1_9FLAO
Panthothenate synthetase {ECO:0000313|EMBL:KIA87583.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_3
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2310..3242
DNA (933bp) protein (311aa)
Peptidyl-prolyl cis-trans isomerase Tax=Flavobacterium sp. F52 RepID=J0RWL7_9FLAO
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
PLM4_32_b1_sep16_scaffold_297_4
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3473..4033)
DNA (561bp) protein (187aa)
alkyl hydroperoxide reductase Tax=Flavobacterium sp. WG21 RepID=UPI00036C098D
Peroxiredoxin {ECO:0000313|EMBL:EJL66507.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
alkyl hydroperoxide reductase
PLM4_32_b1_sep16_scaffold_297_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4145..4501
DNA (357bp) protein (119aa)
Export-related chaperone CsaA Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FHV1_FLAJ1
tRNA-binding protein {ECO:0000313|EMBL:KIA82496.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
export-related chaperone CsaA
PLM4_32_b1_sep16_scaffold_297_6
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4632..5159)
DNA (528bp) protein (176aa)
Putative uncharacterized protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XA3_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:KFC59115.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5266..5790)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Fibrella aestuarina BUZ 2 RepID=I0K5V6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFC59116.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
putative protein ywjB
PLM4_32_b1_sep16_scaffold_297_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6474..7022)
DNA (549bp) protein (183aa)
Putative esterase of the alpha/beta hydrolase fold containing protein Tax=Flavobacterium sp. CF136 RepID=J3C8N3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC59117.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7321..7686)
DNA (366bp) protein (122aa)
DNA-binding protein {ECO:0000313|EMBL:KFC59127.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Putative uncharacterized protein bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
DNA-binding protein
PLM4_32_b1_sep16_scaffold_297_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7770..9530)
DNA (1761bp) protein (587aa)
ABC transporter, transmembrane region:ABC transporter Tax=Flavobacterium frigoris PS1 RepID=H7FT95_9FLAO
ABC transporter {ECO:0000313|EMBL:KFC59128.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
ABC transporter-like protein
PLM4_32_b1_sep16_scaffold_297_11
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9732..10838
DNA (1107bp) protein (369aa)
Leucine dehydrogenase Tax=Flavobacterium frigoris PS1 RepID=H7FT96_9FLAO
Leucine dehydrogenase {ECO:0000313|EMBL:KIA94652.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
Glu/Leu/Phe/Val dehydrogenase
PLM4_32_b1_sep16_scaffold_297_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11107..12096
DNA (990bp) protein (330aa)
Transcription antitermination factor NusB Tax=Flavobacterium sp. CF136 RepID=J2JET0_9FLAO
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
transcription termination factor-like protein
PLM4_32_b1_sep16_scaffold_297_13
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12175..12447
DNA (273bp) protein (91aa)
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KIA82488.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Preprotein translocase subunit YajC bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
preprotein translocase subunit YajC
PLM4_32_b1_sep16_scaffold_297_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12528..13082)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030D9976
Uncharacterized protein {ECO:0000313|EMBL:KFC59133.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13429..14022)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI00034C8599
Uncharacterized protein {ECO:0000313|EMBL:KIA82487.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14026..15327)
DNA (1302bp) protein (434aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
peptidase T (EC:3.4.11.4)
Peptidase T Tax=Flavobacterium frigoris PS1 RepID=H7FTA1_9FLAO
PLM4_32_b1_sep16_scaffold_297_17
Spiroplasma sabaudiense, Spiroplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(15460..16290)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Neisseria RepID=F9EYX1_9NEIS
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000313|EMBL:AHI54151.1}; species="Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.;" source="Spiroplasma sabaudiense Ar-1343.;"
PLM4_32_b1_sep16_scaffold_297_18
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16690..18597)
DNA (1908bp) protein (636aa)
Uncharacterized protein Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GXI7_FLAPJ
Uncharacterized protein {ECO:0000313|EMBL:KFC59136.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_19
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18948..19700)
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FE88_DESAA
Uncharacterized protein {ECO:0000313|EMBL:ACL06869.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_297_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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19984..20946
DNA (963bp) protein (321aa)
Kef-type K+ transport system, putative NAD-binding component Tax=Flavobacterium frigoris PS1 RepID=H7FLN7_9FLAO
Inward rectifier potassium channel Irk {ECO:0000313|EMBL:KFC59137.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
irk; Inward rectifier potassium channel Irk
PLM4_32_b1_sep16_scaffold_297_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(20933..21643)
DNA (711bp) protein (237aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E0F211
silent information regulator protein Sir2
PLM4_32_b1_sep16_scaffold_297_22
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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21697..22356
DNA (660bp) protein (220aa)
tRNA (Guanosine18-2'-O-)-methyltransferase Tax=Flavobacterium frigoris PS1 RepID=H7FTB3_9FLAO
rRNA methyltransferase {ECO:0000313|EMBL:KIA82475.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
rRNA methyltransferase
Displaying 22 items

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