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PLM4_32_b1_sep16_scaffold_841

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_841_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Rhomboid family protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBC5_FLAJ1
Protease {ECO:0000313|EMBL:KFC57818.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
rhomboid family protein
PLM4_32_b1_sep16_scaffold_841_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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296..1165
DNA (870bp) protein (290aa)
putative lipid A biosynthesis acyltransferase (EC:2.3.1.-)
Lipd A biosynthesis protein {ECO:0000313|EMBL:KFC57817.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Putative lipd A biosynthesis related exported protein bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
PLM4_32_b1_sep16_scaffold_841_3
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1281..2150
DNA (870bp) protein (290aa)
Lipd A biosynthesis protein {ECO:0000313|EMBL:KFC57817.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Putative lipd A biosynthesis related exported protein bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
lipid A biosynthesis acyltransferase
PLM4_32_b1_sep16_scaffold_841_4
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2336..3841)
DNA (1506bp) protein (502aa)
Cysteine desulfurase Tax=Flavobacterium frigoris PS1 RepID=H7FW87_9FLAO
Selenocysteine lyase {ECO:0000313|EMBL:KIA86228.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
class V aminotransferase
PLM4_32_b1_sep16_scaffold_841_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4220..4501
DNA (282bp) protein (94aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000380ED4F
Uncharacterized protein {ECO:0000313|EMBL:GAO42033.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_841_6
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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4781..5308
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Flavobacterium enshiense DK69 RepID=V6SLB2_9FLAO
cupin domain-containing protein
Tax=GWA2_Bacteroidetes_30_7_curated
PLM4_32_b1_sep16_scaffold_841_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5399..6787)
DNA (1389bp) protein (463aa)
phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase {ECO:0000313|EMBL:KFC57616.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Phosphomannomutase / Phosphoglucosamine mutase bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
PLM4_32_b1_sep16_scaffold_841_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7086..7607
DNA (522bp) protein (174aa)
Acyl carrier protein phosphodiesterase Tax=Flavobacterium frigoris PS1 RepID=H7FW99_9FLAO
ACP phosphodiesterase {ECO:0000313|EMBL:KIA86218.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_841_9
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7611..9296
DNA (1686bp) protein (562aa)
ggt1; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase Tax=Flavobacterium frigoris PS1 RepID=H7FWA0_9FLAO
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:KIA86217.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
PLM4_32_b1_sep16_scaffold_841_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9571..11256
DNA (1686bp) protein (562aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase Tax=Flavobacterium frigoris PS1 RepID=H7FWA1_9FLAO
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:KIA86216.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
PLM4_32_b1_sep16_scaffold_841_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11402..12070
DNA (669bp) protein (223aa)
alkD; DNA alkylation repair enzyme AlkD (EC:3.2.2.-)
AlkD protein {ECO:0000313|EMBL:KFC58371.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA alkylation repair enzyme AlkD bin=GWA2_Flavobacterium_35_26 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
PLM4_32_b1_sep16_scaffold_841_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12128..12997)
DNA (870bp) protein (290aa)
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region Tax=Flavobacterium sp. CF136 RepID=J3BX24_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KGD68330.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
Displaying 12 items

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