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PLM4_32_b1_sep16_scaffold_2809

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2809_1
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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3..461
DNA (459bp) protein (153aa)
UDP-glucose 6-dehydrogenase Tax=Leptospirillum ferrodiazotrophum RepID=C6HYL8_9BACT
UDP-N-acetyl-D-glucosamine dehydrogenase
Tax=CG_Delta_01
PLM4_32_b1_sep16_scaffold_2809_2
Caldithrix abyssi, Caldithrix, Bacteria

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506..1456
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase Tax=Caldithrix abyssi DSM 13497 RepID=H1XUR4_9BACT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHO41613.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
NAD-dependent epimerase/dehydratase
PLM4_32_b1_sep16_scaffold_2809_3
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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1468..2499
DNA (1032bp) protein (344aa)
Polysaccharide export protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHY1_DESAR bin=16ft_combo_ws3_JS1 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polysaccharide export protein
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_32_b1_sep16_scaffold_2809_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2520..4193
DNA (1674bp) protein (558aa)
Protein-tyrosine kinase Tax=Nitrosococcus oceani RepID=Q3JB13_NITOC bin=16ft_combo_ws3_JS1 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polysaccharide chain length determinant protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_2809_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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4196..4900
DNA (705bp) protein (235aa)
Tyrosine-protein kinase EpsD (EC:2.7.10.2)
Exopolysaccharide biosynthesis protein Tax=Lactobacillus acidophilus RepID=Q5FIC7_LACAC
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_32_b1_sep16_scaffold_2809_6
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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4926..6092
DNA (1167bp) protein (389aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase Tax=Desulfovibrio sp. U5L RepID=I2Q335_9DELT
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
PLM4_32_b1_sep16_scaffold_2809_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6089..7153
DNA (1065bp) protein (355aa)
Oxidoreductase Tax=Sorangium cellulosum So0157-2 RepID=S4XQK7_SORCE
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AGP34125.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_32_b1_sep16_scaffold_2809_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7150..8163
DNA (1014bp) protein (338aa)
Epimerase Tax=Sorangium cellulosum So0157-2 RepID=S4XNI3_SORCE
epimerase
Epimerase {ECO:0000313|EMBL:AGP34124.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_32_b1_sep16_scaffold_2809_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8938..9384
DNA (447bp) protein (149aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8Z2_SORC5
Uncharacterized protein {ECO:0000313|EMBL:ETX01917.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_32_b1_sep16_scaffold_2809_10

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9381..10376
DNA (996bp) protein (332aa)
Iron-sulfur cluster-binding protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ83_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKN13203.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Iron-sulfur cluster-binding protein
PLM4_32_b1_sep16_scaffold_2809_11
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10695..13370
DNA (2676bp) protein (892aa)
Putative RTX toxin hemolysin-type calcium-binding protein {ECO:0000313|EMBL:GAL63610.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
polysaccharide lyase bin=bin1_lowGC species=Paenibacillus sanguinis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
carbohydrate-binding protein
PLM4_32_b1_sep16_scaffold_2809_12
unknown

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13384..14181
DNA (798bp) protein (266aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2809_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14293..15495
DNA (1203bp) protein (401aa)
Glycosyl transferase, family I bin=GWC2_Planctomycete_KSU_39_26 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_b1_sep16_scaffold_2809_14
unknown

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15492..16652
DNA (1161bp) protein (387aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2809_15
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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16649..17851
DNA (1203bp) protein (401aa)
Polysaccharide deacetylase Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPQ7_DESBD
polysaccharide deacetylase
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_32_b1_sep16_scaffold_2809_16
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17848..19083
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00037F9AB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50402.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
PLM4_32_b1_sep16_scaffold_2809_17
unknown

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19076..19366
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 17 items

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