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PLM4_32_b1_sep16_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_129_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..384
DNA (384bp) protein (128aa)
ppd:Ppro_3567 hypothetical protein; K09118 hypothetical protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_129_2
unknown

Not on your lists

461..2278
DNA (1818bp) protein (606aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_129_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2309..3274)
DNA (966bp) protein (322aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIG1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43339.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_32_b1_sep16_scaffold_129_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3514..4617
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Pseudomonas aeruginosa BWHPSA020 RepID=U8SIN3_PSEAI
addiction module protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_32_b1_sep16_scaffold_129_5
candidate division Zixibacteria, Bacteria

Not on your lists

comp(4643..5044)
DNA (402bp) protein (134aa)
id=1250966 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Uncharacterized protein {ECO:0000313|EMBL:EQB63829.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
PLM4_32_b1_sep16_scaffold_129_6
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5361..5909
DNA (549bp) protein (183aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_55_46 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM4_32_b1_sep16_scaffold_129_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5927..6778
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE31_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40758.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_129_8
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6783..7445
DNA (663bp) protein (221aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000374A931
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV68719.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
PLM4_32_b1_sep16_scaffold_129_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8522..11281
DNA (2760bp) protein (920aa)
Serine/threonine protein kinase bin=CD_OP8_4m species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonin protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_b1_sep16_scaffold_129_10
unknown

Not on your lists

11346..11687
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_129_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11778..14213)
DNA (2436bp) protein (812aa)
Antirepressor regulating drug resistance protein Tax=Singulisphaera acidiphila RepID=L0DNH4_SINAD
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG88998.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_129_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14210..14593)
DNA (384bp) protein (128aa)
Putative transcriptional regulator Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNX5_SINAD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA30366.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_32_b1_sep16_scaffold_129_13
unknown

Not on your lists

comp(14697..14906)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_129_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15250..15528
DNA (279bp) protein (93aa)
RNP-1 like RNA-binding protein Tax=Desulfovibrio sp. X2 RepID=S7VCV9_9DELT
RNA-binding protein {ECO:0000313|EMBL:KHK00890.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
RNP-1 like RNA-binding protein
PLM4_32_b1_sep16_scaffold_129_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15899..16627)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ64_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01065.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM4_32_b1_sep16_scaffold_129_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16756..18012
DNA (1257bp) protein (419aa)
Outer membrane protein/protective antigen OMA87 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KY24_SOLCM
outer membrane protein/protective antigen OMA87
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:AFD05762.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM4_32_b1_sep16_scaffold_129_17
unknown

Not on your lists

comp(18021..18362)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_129_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18359..18757)
DNA (399bp) protein (133aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037332BF
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
PLM4_32_b1_sep16_scaffold_129_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18776..19105)
DNA (330bp) protein (110aa)
membrane protein Tax=Methyloversatilis sp. NVD RepID=UPI00035F6951
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM4_32_b1_sep16_scaffold_129_20
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19250..21382
DNA (2133bp) protein (711aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037BC9E0
Putative uncharacterized protein {ECO:0000313|EMBL:GAB06272.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_129_21
Candidatus Cloacimonas acidaminovorans, Candidatus Cloacimonas, Cloacimonetes, Bacteria

Not on your lists

21321..23066
DNA (1746bp) protein (582aa)
Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) {ECO:0000313|EMBL:CAO80087.1}; EC=2.1.2.5 {ECO:0000313|EMBL:CAO80087.1};; EC=4.3.1.4 {ECO:0000313|EMBL:CAO80087.1};; species="Bacteria; Cloacimonetes; Candidatus Cloacimonas.;" source="Cloacamonas acidaminovorans (strain Evry).;"
Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VF35_CLOAI
glutamate formiminotransferase
PLM4_32_b1_sep16_scaffold_129_22
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23345..25129
DNA (1785bp) protein (595aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YCD5_SORCE
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_32_b1_sep16_scaffold_129_23
unknown

Not on your lists

comp(25143..25712)
DNA (570bp) protein (190aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_129_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25892..27349)
DNA (1458bp) protein (486aa)
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG91892.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_129_25
Pseudothermotoga lettingae, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(27346..28026)
DNA (681bp) protein (227aa)
ABC transporter related Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F5E0_THELT
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABV33374.1}; Flags: Precursor;; species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC; 107922 / TMO) (Thermotoga lettingae).;"
PLM4_32_b1_sep16_scaffold_129_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28027..29235)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Ornithinimicrobium pekingense RepID=UPI0003B67291
protein of unknown function DUF214
Uncharacterized protein {ECO:0000313|EMBL:AHG91894.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_129_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29232..30059)
DNA (828bp) protein (276aa)
ABC transporter permease Tax=Haloferax prahovense DSM 18310 RepID=M0FW49_9EURY
protein of unknown function DUF214
Uncharacterized protein {ECO:0000313|EMBL:AHG91895.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_129_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

30199..31182
DNA (984bp) protein (328aa)
sulfatase-modifying factor 1 Tax=Methylohalobius crimeensis RepID=UPI0003B4F7F0
Uncharacterized protein {ECO:0000313|EMBL:EEF58473.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_129_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

31217..31897
DNA (681bp) protein (227aa)
Hydrolase, haloacid dehalogenase-like family bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Haloacid dehalogenase domain-containing protein hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_129_30
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

32058..32642
DNA (585bp) protein (195aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4N2_DESAP
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
Displaying items 1-30 of 75 in total

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