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PLM4_32_b1_sep16_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_310_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(1..1737)
DNA (1737bp) protein (579aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ICP1_PHYMF
Uncharacterized protein {ECO:0000313|EMBL:KDA54124.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_310_2
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2082..2981
DNA (900bp) protein (300aa)
glycosyl transferase family protein (EC:2.4.1.-)
Putative glycosyltransferase (Family 2) {ECO:0000313|EMBL:CAJ35482.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAJ35482.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
Putative glycosyltransferase (Family 2) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W811_UNCMA
PLM4_32_b1_sep16_scaffold_310_3
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

3004..3876
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7R7_METTP
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PLM4_32_b1_sep16_scaffold_310_4
unknown

Not on your lists

comp(3897..4133)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_310_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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4174..6855
DNA (2682bp) protein (894aa)
membrane alanyl aminopeptidase (EC:3.4.11.2)
Membrane alanyl aminopeptidase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_32_b1_sep16_scaffold_310_6
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

7038..7298
DNA (261bp) protein (87aa)
Putative membrane protein Tax=Waddlia chondrophila RepID=D6YWG7_WADCW
hypothetical protein
Tax=GWA2_Nitrospirae_42_11_curated
PLM4_32_b1_sep16_scaffold_310_7
unknown

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7279..7728
DNA (450bp) protein (150aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_310_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7733..8593
DNA (861bp) protein (287aa)
ATP synthase subunit a Tax=Protochlamydia amoebophila (strain UWE25) RepID=ATP6_PARUW bin=16ft_combo_ws3_JS1 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
atpB; H+-transporting two-sector ATPase (chain a, atpB)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_310_9
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

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8623..8856
DNA (234bp) protein (78aa)
atpE-B; ATP synthase subunit c; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
atpE-B; ATP synthase subunit c
Tax=RBG_16_Nitrospirae_43_11_curated
PLM4_32_b1_sep16_scaffold_310_10
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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8920..9099
DNA (180bp) protein (60aa)
atpF; ATP synthase subunit b; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ATP synthase F0 subunit beta
Tax=RBG_16_Zixibacteria_40_9_curated
PLM4_32_b1_sep16_scaffold_310_11
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

9041..9406
DNA (366bp) protein (122aa)
atpF; ATP synthase B chain (EC:3.6.3.14) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ATP synthase F0, subunit B
Tax=RBG_16_Nitrospirae_43_11_curated
PLM4_32_b1_sep16_scaffold_310_12
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9410..9952
DNA (543bp) protein (181aa)
ATP synthase subunit delta Tax=Clostridium ultunense Esp RepID=M1ZK21_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
ATP synthase subunit delta
PLM4_32_b1_sep16_scaffold_310_13
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

9978..11504
DNA (1527bp) protein (509aa)
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
atpA; F0F1 ATP synthase subunit alpha
Tax=RBG_16_Zixibacteria_53_22_curated
PLM4_32_b1_sep16_scaffold_310_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11521..12432
DNA (912bp) protein (304aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_310_15
candidate division Zixibacteria, Bacteria

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12457..13911
DNA (1455bp) protein (485aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LDZ4_9BACT
PLM4_32_b1_sep16_scaffold_310_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

13940..14224
DNA (285bp) protein (95aa)
ATP synthase epsilon chain Tax=Desulfotomaculum RepID=ATPE_DESRM bin=16ft_combo_ws3_JS1 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATP synthase subunit epsilon
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_310_17
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14231..16000)
DNA (1770bp) protein (590aa)
UPI0003D1A02B related cluster Tax=unknown RepID=UPI0003D1A02B
PAS domain S-box {ECO:0000313|EMBL:ETA69072.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
multi-sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_310_18
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

16164..18317
DNA (2154bp) protein (718aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L933_9BACT
O-linked GlcNAc transferase-TPR-containing transmembrane protein
Tax=RBG_16_Zixibacteria_48_11_curated
PLM4_32_b1_sep16_scaffold_310_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18314..19291
DNA (978bp) protein (326aa)
Ppx/GppA phosphatase Tax=Aminomonas paucivorans DSM 12260 RepID=E3CXJ1_9BACT
ppx/GppA phosphatase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_310_20
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19279..19977)
DNA (699bp) protein (233aa)
Pseudouridine synthase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHE4_SYNFM
pseudouridine synthase
Tax=CG_Syntroph_02
PLM4_32_b1_sep16_scaffold_310_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20091..21017
DNA (927bp) protein (309aa)
antibiotic ABC transporter ATP-binding protein Tax=Serinicoccus profundi RepID=UPI000255EC90
ABC-type multidrug transporter, ATPase component
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_310_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

21022..22272
DNA (1251bp) protein (417aa)
arginine deiminase (EC:3.5.3.6)
Arginine deiminase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM4_32_b1_sep16_scaffold_310_23

Not on your lists

22280..23191
DNA (912bp) protein (304aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V379_HALED
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_01_H07.;"
PLM4_32_b1_sep16_scaffold_310_24
unknown

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23986..24375
DNA (390bp) protein (130aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_310_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24376..25497
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B31EA9
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_310_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

25494..27182
DNA (1689bp) protein (563aa)
Peptidase M28 Tax=Pontibacter sp. BAB1700 RepID=J0LF51_9BACT
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_310_27
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(27142..28113)
DNA (972bp) protein (324aa)
Patatin Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT10_TRURR
patatin
Patatin {ECO:0000313|EMBL:ADI15473.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
PLM4_32_b1_sep16_scaffold_310_28
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28253..28801
DNA (549bp) protein (183aa)
Putative uncharacterized protein Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S8G6_SHEAM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM00673.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
PLM4_32_b1_sep16_scaffold_310_29
unknown

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28837..29481
DNA (645bp) protein (215aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_310_30
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29502..29966
DNA (465bp) protein (155aa)
Putative uncharacterized protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607D3_METCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92128.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Displaying items 1-30 of 93 in total

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