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PLM4_65_coex_sep16_scaffold_19

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Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_19_1
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

235..2130
DNA (1896bp) protein (632aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(2158..3159)
DNA (1002bp) protein (334aa)
Putative Integral membrane protein bin=GWF2_Planctomycete_41_51 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_3
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3174..4175)
DNA (1002bp) protein (334aa)
lipid-A-disaccharide synthase bin=GWF2_Planctomycete_41_51 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
lipid-A-disaccharide synthase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4777..6900
DNA (2124bp) protein (708aa)
hypothetical protein Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00038282CA
filamentous hemagglutinin outer membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM4_65_coex_sep16_scaffold_19_5
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

7362..7937
DNA (576bp) protein (192aa)
id=4484031 bin=GWF2_Planctomycetes_42_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_19_6
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7934..9613
DNA (1680bp) protein (560aa)
id=4429839 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_19_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9620..10372)
DNA (753bp) protein (251aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_8
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(10540..12336)
DNA (1797bp) protein (599aa)
id=4429837 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_19_trna_3
unknown

Not on your lists

comp(12542..12628)
DNA (87bp)
transferRNA Ser
PLM4_65_coex_sep16_scaffold_19_9

Not on your lists

comp(12951..13658)
DNA (708bp) protein (236aa)
ribonuclease III (EC:3.1.26.3)
Marine sediment metagenome DNA, contig: S01H1_L05007 {ECO:0000313|EMBL:GAF74296.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ribonuclease 3 bin=GWF2_Planctomycetes_50_10 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
PLM4_65_coex_sep16_scaffold_19_10
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13661..13996)
DNA (336bp) protein (112aa)
Stage II sporulation protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_19_11
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14225..15511)
DNA (1287bp) protein (429aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase bin=GWC2_Planctomycetes_45_44 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=BJP_IG2158_Planctomycetes_45_10
PLM4_65_coex_sep16_scaffold_19_12
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15700..17229)
DNA (1530bp) protein (510aa)
comM protein bin=GWF2_Planctomycetes_50_10 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Mg chelatase subunit ChlI
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_19_13
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

17427..17699
DNA (273bp) protein (91aa)
Predicted enzyme of the cupin superfamily bin=GWC2_Planctomycetes_45_44 species=Prochlorococcus marinus genus=Prochlorococcus taxon_order=Prochlorales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Predicted enzyme of the cupin superfamily
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_coex_sep16_scaffold_19_14
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17881..18495)
DNA (615bp) protein (205aa)
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_19_15
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18782..19117)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI00034C9059
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHL22815.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
PLM4_65_coex_sep16_scaffold_19_16

Not on your lists

comp(19107..19421)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Marine sediment metagenome DNA, contig: S03H2_S00785 {ECO:0000313|EMBL:GAH57788.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase beta domain-containing protein
PLM4_65_coex_sep16_scaffold_19_17
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19467..20912)
DNA (1446bp) protein (482aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_65_coex_sep16_scaffold_19_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20974..21606)
DNA (633bp) protein (211aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037FDA56
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_19
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(21655..22986)
DNA (1332bp) protein (444aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037AF263
oxidoreductase domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_20
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(23212..25164)
DNA (1953bp) protein (651aa)
Multi-sensor signal transduction histidine kinase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPQ8_SIDLE
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_19_21
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

25734..26615
DNA (882bp) protein (294aa)
Uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_19_22
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

26640..27695
DNA (1056bp) protein (352aa)
id=3695393 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_19_23
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

comp(27744..29450)
DNA (1707bp) protein (569aa)
Carbon starvation protein A bin=GWC2_Planctomycetes_45_44 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
cstA; Carbon starvation protein A
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
PLM4_65_coex_sep16_scaffold_19_24
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(29504..30853)
DNA (1350bp) protein (450aa)
probable GTP-binding protein bin=GWF2_Planctomycetes_42_9 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
small GTP-binding protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_19_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(31076..31306)
DNA (231bp) protein (77aa)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(31306..32748)
DNA (1443bp) protein (481aa)
deoxycytidylate deaminase-related protein bin=GWF2_Planctomycetes_50_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
deoxycytidylate deaminase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_19_27
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

32929..33987
DNA (1059bp) protein (353aa)
Endoglucanase Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCY1_DICT6
endoglucanase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_19_28
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(34013..34234)
DNA (222bp) protein (74aa)
XRE family transcriptional regulator Tax=Paenibacillus terrigena RepID=UPI0003659D07
XRE family transcriptional regulator
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_19_29
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(34227..34655)
DNA (429bp) protein (143aa)
id=3695183 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=BJP_IG2158_Planctomycetes_45_10
Displaying items 1-30 of 120 in total

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