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PLM4_65_coex_sep16_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_68_1
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

410..769
DNA (360bp) protein (120aa)
Flagellar basal body rod protein FlgB bin=GWF2_Planctomycete_41_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
flagellar basal-body rod protein FlgB
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_68_2
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

861..1262
DNA (402bp) protein (134aa)
Flagellar basal-body rod protein FlgC bin=GWF2_Planctomycetes_50_10 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
flgC; flagellar basal-body rod protein FlgC (cell-proximal rod protein)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_68_3
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

1278..1640
DNA (363bp) protein (121aa)
Flagellar hook-basal body complex protein FliE bin=GWF2_Planctomycete_41_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_68_4
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

1703..3220
DNA (1518bp) protein (506aa)
Similar to flagellar MS ring protein bin=GWF2_Planctomycete_41_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
flagellar M-ring protein FliF
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_68_5
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

3221..4216
DNA (996bp) protein (332aa)
Flagellar motor switch protein FliG bin=GWF2_Planctomycetes_42_9 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
flagellar motor switch protein FliG
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_68_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

4221..4796
DNA (576bp) protein (192aa)
id=4492521 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
flagellar biosynthesis/type III secretory pathway protein-like
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_68_7
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

4800..6164
DNA (1365bp) protein (455aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.15)
Flagellar protein export ATPase FliI bin=GWF2_Planctomycete_41_51 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_68_8
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

6245..6679
DNA (435bp) protein (145aa)
Flagellar biosynthesis chaperone FliJ bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_68_9
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

6672..7394
DNA (723bp) protein (241aa)
id=4492525 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_68_10
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7399..8169
DNA (771bp) protein (257aa)
MotA/TolQ/ExbB proton channel bin=GWF2_Planctomycetes_50_10 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
MotA/TolQ/ExbB proton channel
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_coex_sep16_scaffold_68_11
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8169..8828
DNA (660bp) protein (220aa)
MotB-like protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
OmpA/MotB protein
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_coex_sep16_scaffold_68_12
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8825..9607
DNA (783bp) protein (261aa)
OmpA/MotB domain protein bin=GWF2_Planctomycetes_42_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_68_13
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

9773..10294
DNA (522bp) protein (174aa)
Flagellar biosynthetic protein FliO bin=GWF2_Planctomycetes_42_9 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_68_14

Not on your lists

10291..11145
DNA (855bp) protein (285aa)
Marine sediment metagenome DNA, contig: S03H2_C03002 {ECO:0000313|EMBL:GAH19749.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Flagellar biosynthetic protein FliP bin=GWF2_Planctomycete_41_51 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
fliP; flagellar biosynthesis protein FliP
PLM4_65_coex_sep16_scaffold_68_15
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11318..11587
DNA (270bp) protein (90aa)
Flagellar biogenesis protein FliQ bin=GWF2_Planctomycete_41_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
fliQ; flagellar biosynthetic protein FliQ
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_68_16
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

11591..12343
DNA (753bp) protein (251aa)
Flagellar biosynthetic protein fliR bin=GWF2_Planctomycetes_42_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
flagellar biosynthetic protein FliR
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_coex_sep16_scaffold_68_17
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12415..13482
DNA (1068bp) protein (356aa)
Flagellar biosynthetic protein FlhB bin=GWF2_Planctomycete_41_51 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
flhB; flagellar biosynthetic protein FlhB
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_68_18
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13543..14415)
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Thioflavicoccus mobilis 8321 RepID=L0GUU6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA89074.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
PLM4_65_coex_sep16_scaffold_68_19
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14617..15303)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI000372D59F
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
PLM4_65_coex_sep16_scaffold_68_20

Not on your lists

15629..15865
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S01H1_C00842 {ECO:0000313|EMBL:GAF83306.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_68_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16029..18383)
DNA (2355bp) protein (785aa)
Flagellar hook-associated protein 2 domain protein bin=GWF2_Planctomycetes_42_9 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
flagellar hook-associated 2 C-terminus family protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_68_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18592..22752)
DNA (4161bp) protein (1387aa)
Methyltransferase FkbM family Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VNX0_9CYAN
methyltransferase FkbM family
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_68_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22756..29208)
DNA (6453bp) protein (2151aa)
Glycosyl transferase family 9 Tax=Desulfovibrio sp. FW1012B RepID=G7QE65_9DELT
Glycosyl transferase family 9 {ECO:0000313|EMBL:EHJ45959.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_68_24
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(29224..30015)
DNA (792bp) protein (264aa)
Nucleoside-diphosphate-sugar pyrophosphorylase family protein bin=GWB2_Elusimicrobium_63_22 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
nucleotidyl transferase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_65_coex_sep16_scaffold_68_25

Not on your lists

comp(29993..30991)
DNA (999bp) protein (333aa)
mpi:Mpet_1390 GHMP kinase; K07031 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Uncharacterized protein {ECO:0000313|EMBL:EKD83494.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GHMP kinase
PLM4_65_coex_sep16_scaffold_68_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(31043..32083)
DNA (1041bp) protein (347aa)
Putative GDP-L-fucose synthase bin=GWB2_Pelobacter_53_15 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_68_27
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(32080..32595)
DNA (516bp) protein (172aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Desulfospira joergensenii RepID=UPI0003B3E87D
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_coex_sep16_scaffold_68_28
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32596..33585)
DNA (990bp) protein (330aa)
NAD-dependent epimerase/dehydratase bin=GWB2_Pelobacter_53_15 species=gamma proteobacterium SCGC AAA001-B15 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
NAD-dependent epimerase/dehydratase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
PLM4_65_coex_sep16_scaffold_68_29
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33610..34368)
DNA (759bp) protein (253aa)
CalS11 bin=GWB2_Pelobacter_53_15 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
crotonobetainyl-CoA:carnitine CoA-transferase
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_65_coex_sep16_scaffold_68_30
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34365..35519)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00038021BF
oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Displaying items 1-30 of 78 in total

View Taxonomy