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PLM4_65_coex_sep16_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_164_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_164_2
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

352..1878
DNA (1527bp) protein (509aa)
Oxidoreductase domain protein Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SRM9_PLABD
oxidoreductase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_164_3
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1920..3158)
DNA (1239bp) protein (413aa)
Mandelate racemase/muconate lactonizing protein Tax=Acetonema longum DSM 6540 RepID=F7NLW0_9FIRM
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_coex_sep16_scaffold_164_4

Not on your lists

comp(3228..3893)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM26296.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Similar to phoU bin=GWC2_Planctomycetes_45_44 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
phoU; phosphate transport system protein
PLM4_65_coex_sep16_scaffold_164_5
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3972..4736)
DNA (765bp) protein (255aa)
Phosphate ABC transporter, ATPase subunit bin=GWF2_Planctomycetes_50_10 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
phosphate ABC transporter ATPase
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_164_6
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4741..5496)
DNA (756bp) protein (252aa)
ABC-type phosphate transporter ATPase component bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ABC-type phosphate transporter ATPase component
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_164_7
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5490..6338)
DNA (849bp) protein (283aa)
Putative phosphate ABC transporter permease protein bin=GWC2_Planctomycetes_45_44 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
phosphate ABC transporter permease
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_164_8
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6335..7204)
DNA (870bp) protein (290aa)
ABC-type phosphate transporter permease component bin=GWC2_Planctomycetes_45_44 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
ABC-type phosphate transporter permease component
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_164_9
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7188..8072)
DNA (885bp) protein (295aa)
ABC-type phosphate transporter phosphate-binding component bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
ABC-type phosphate transporter phosphate-binding component
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_164_10
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8281..8676)
DNA (396bp) protein (132aa)
Response regulator receiver protein bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_164_11
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(8972..10072)
DNA (1101bp) protein (367aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
response regulator receiver sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM4_65_coex_sep16_scaffold_164_12

Not on your lists

comp(10121..10909)
DNA (789bp) protein (263aa)
Marine sediment metagenome DNA, contig: S01H1_S13771 {ECO:0000313|EMBL:GAG09736.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
sensor histidine kinase/response regulator
PLM4_65_coex_sep16_scaffold_164_13
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(11147..12499)
DNA (1353bp) protein (451aa)
Fis family transcriptional regulator bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Fis family transcriptional regulator
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_coex_sep16_scaffold_164_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(12500..14422)
DNA (1923bp) protein (641aa)
Histidine kinase bin=GWC2_Chloroflexi_49_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_164_15
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(14867..17989)
DNA (3123bp) protein (1041aa)
Serine/threonine protein kinase related protein Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJP4_9BACT
WD40-like repeat protein
Tax=CG_Arma_01
PLM4_65_coex_sep16_scaffold_164_16
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18039..19307)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTY9_ROSS1
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_164_17
unknown

Not on your lists

comp(19313..19465)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_164_18
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

19531..21567
DNA (2037bp) protein (679aa)
Uncharacterized protein bin=GWC2_Bacteroidetes_40_22 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_164_19
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21720..22685)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000373ADDD
Tax=RBG_16_Planctomycetes_64_10_curated
PLM4_65_coex_sep16_scaffold_164_20
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22805..23746)
DNA (942bp) protein (314aa)
Xylose isomerase domain protein TIM barrel Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYT4_OPITP
xylose isomerase domain-containing protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_164_21
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(23829..25259)
DNA (1431bp) protein (477aa)
Sulfatase Tax=Chthoniobacter flavus Ellin428 RepID=B4D3U0_9BACT
sulfatase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_coex_sep16_scaffold_164_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25256..28420)
DNA (3165bp) protein (1055aa)
hypothetical protein Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00036887ED
putative pectin lyase
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_65_coex_sep16_scaffold_164_23
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(28496..28984)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTD8_METAC
hypothetical protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_164_24
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(29132..30475)
DNA (1344bp) protein (448aa)
Probable streptomycin biosynthesis protein strI Tax=Planctomyces maris DSM 8797 RepID=A6CCE1_9PLAN
oxidoreductase domain-containing protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_164_25
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

30830..31621
DNA (792bp) protein (264aa)
id=3884971 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_coex_sep16_scaffold_164_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

31835..32578
DNA (744bp) protein (248aa)
Amidohydrolase 2 Tax=Rhodopirellula baltica SWK14 RepID=L7CP32_RHOBT
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_164_27
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

32873..35437
DNA (2565bp) protein (855aa)
N-6 DNA methylase Tax=Chthoniobacter flavus Ellin428 RepID=B4DBY8_9BACT
hypothetical protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_164_28

Not on your lists

35440..35982
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL25436.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_164_29
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

36414..37991
DNA (1578bp) protein (526aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase bin=GWF2_Planctomycete_41_51 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_164_30
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

38009..39271
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit bin=GWF2_Planctomycetes_42_9 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
3-isopropylmalate dehydratase large subunit
Tax=RBG_13_Planctomycetes_62_9_curated
Displaying items 1-30 of 43 in total

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