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PLM4_65_coex_sep16_scaffold_396

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_396_1
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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3..398
DNA (396bp) protein (132aa)
Phytochrome, two-component sensor histidine kinase Tax=Nitrosospira sp. APG3 RepID=M5DIY4_9PROT
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_2
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(399..7664)
DNA (7266bp) protein (2422aa)
Putative uncharacterized protein Tax=Trichomonas vaginalis RepID=A2F6J1_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAX99489.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_396_3
unknown

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7847..8272
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_396_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(8779..11718)
DNA (2940bp) protein (980aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZP5_METBU
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_396_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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12301..12690
DNA (390bp) protein (130aa)
id=4124440 bin=GWF2_Planctomycetes_42_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_396_6
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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13798..14883
DNA (1086bp) protein (362aa)
Polysaccharide export protein Tax=Hydrogenophaga sp. PBC RepID=I4MLY5_9BURK
polysaccharide export protein EpsE
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_396_7
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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14983..17268
DNA (2286bp) protein (762aa)
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SG60_PLABD
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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17583..18131
DNA (549bp) protein (183aa)
NGN domain-containing protein bin=GWC2_Planctomycetes_45_44 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
transcription antiterminator
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_9
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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18128..19705
DNA (1578bp) protein (526aa)
Membrane protein containing Glycosyl transferase, group 1 domain protein Tax=Rhodopirellula maiorica SM1 RepID=M5R874_9PLAN
glycosyl transferase family protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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19702..21327
DNA (1626bp) protein (542aa)
polysaccharide biosynthesis protein Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E86 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein involved in the export of O-antigen and teichoic acid
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_11
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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21363..21860
DNA (498bp) protein (166aa)
hldE; HldE (EC:2.7.7.39)
HldE {ECO:0000313|EMBL:ACN14919.1}; EC=2.7.7.39 {ECO:0000313|EMBL:ACN14919.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
HldE Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QBQ7_DESAH
PLM4_65_coex_sep16_scaffold_396_12

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21886..22695
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BEI8_STRRD
Uncharacterized protein {ECO:0000313|EMBL:KKN51254.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_396_13
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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22695..23666
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Parabacteroides sp. D25 RepID=K6ADK5_9PORP
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
PLM4_65_coex_sep16_scaffold_396_14
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

23995..25218
DNA (1224bp) protein (408aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_396_15
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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25233..26432
DNA (1200bp) protein (400aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
polysaccharide biosynthesis protein, putative
Tax=RBG_16_RIF03_38_10_curated
PLM4_65_coex_sep16_scaffold_396_16
RLO_RIF05_58_11, RIF5, Bacteria

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26448..27857
DNA (1410bp) protein (470aa)
Uncharacterized protein Tax=Plesiomonas shigelloides 302-73 RepID=R8AVC5_PLESH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_coex_sep16_scaffold_396_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27879..28979
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4P7_GEOUR
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ26765.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_396_18
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

29055..29600
DNA (546bp) protein (182aa)
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9V227_9ACTO
hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_396_19
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

29773..30798
DNA (1026bp) protein (342aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
Displaying 19 items

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