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PLM4_65_coex_sep16_scaffold_3825

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3825_1
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(3..1427)
DNA (1425bp) protein (475aa)
Two-component sensor histidine kinase bin=GWF2_Planctomycete_41_51 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
histidine kinase
Tax=GWF2_Planctomycetes_41_51_curated
PLM4_65_coex_sep16_scaffold_3825_2
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(1627..3318)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein bin=GWF2_Planctomycete_41_51 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
methyl-accepting chemotaxis sensory transducer
Tax=GWF2_Planctomycetes_41_51_curated
PLM4_65_coex_sep16_scaffold_3825_3
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(3407..5227)
DNA (1821bp) protein (607aa)
Carbohydrate-selective porin bin=GWC2_Planctomycetes_45_44 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
carbohydrate-selective porin
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_3825_4
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(5261..5794)
DNA (534bp) protein (178aa)
Chemotaxis protein bin=GWF2_Planctomycetes_42_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
chemotaxis protein
Tax=GWF2_Planctomycetes_42_9_curated
PLM4_65_coex_sep16_scaffold_3825_5

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comp(6640..7290)
DNA (651bp) protein (217aa)
Two-component response regulator Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSF1_SYNAS
Uncharacterized protein {ECO:0000313|EMBL:KKM74677.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
two-component response regulator
PLM4_65_coex_sep16_scaffold_3825_6
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

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comp(7291..8817)
DNA (1527bp) protein (509aa)
Response regulator receiver sensor signal transduction histidine kinase bin=GWE2_RBX1_39_32 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS domain-containing protein
Tax=BJP_IG2158_Planctomycetes_45_10
Displaying 6 items

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