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PLM4_65_coex_sep16_scaffold_2752

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2752_1
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

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3..1304
DNA (1302bp) protein (434aa)
O-antigen ligase-related protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
PLM4_65_coex_sep16_scaffold_2752_2
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(1318..2181)
DNA (864bp) protein (288aa)
Tax=CG_CPR04_01
PLM4_65_coex_sep16_scaffold_2752_3
R_OD1_Yanofskybacteria_49_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2247..2849
DNA (603bp) protein (201aa)
Thermostable uracil-DNA glycosylase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_17_curated
PLM4_65_coex_sep16_scaffold_2752_4
GWC2_OD1_41_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2850..3536
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS25781.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_41_9.;"
SNARE associated protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane-associated protein
PLM4_65_coex_sep16_scaffold_2752_5
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3539..4783
DNA (1245bp) protein (415aa)
serine protease precursor (EC:3.4.21.-)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
PLM4_65_coex_sep16_scaffold_2752_6
GWC1_OD1_39_29_partial, Parcubacteria, Bacteria

Not on your lists

4921..5538
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR14499.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_29.;"
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane protein
PLM4_65_coex_sep16_scaffold_2752_7
GWC2_OD1_41_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5541..6677
DNA (1137bp) protein (379aa)
undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase (EC:2.4.1.227)
Uncharacterized protein {ECO:0000313|EMBL:KKS27289.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_41_9.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PLM4_65_coex_sep16_scaffold_2752_8
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6674..7519
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT81179.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA polymerase III subunit delta'
PLM4_65_coex_sep16_scaffold_2752_9
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

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7563..8117
DNA (555bp) protein (185aa)
Ribosome-recycling factor {ECO:0000313|EMBL:KKT82654.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
Ribosome-recycling factor bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ribosome-recycling factor
PLM4_65_coex_sep16_scaffold_2752_10
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8114..9193
DNA (1080bp) protein (360aa)
Membrane-associated zinc metalloprotease bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_2752_11
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


9190..10443
DNA (1254bp) protein (418aa)
Prolyl-tRNA synthetase bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
prolyl-tRNA synthetase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_2752_12
GWF2_OD1_43_596, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10576..10818
DNA (243bp) protein (81aa)
Cell shape determining protein, MreB/Mrl family bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:KKT15914.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWF2_43_596.;"
rod shape-determining protein MreB
PLM4_65_coex_sep16_scaffold_2752_13
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10892..11521
DNA (630bp) protein (210aa)
Cell shape determining protein, MreB/Mrl family bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
mreB2; MreB
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_2752_14
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11712..12485
DNA (774bp) protein (258aa)
Cell shape-determining protein MreC bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_2752_15
R_OD1_Yanofskybacteria_50_12, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12482..13012
DNA (531bp) protein (177aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_50_12_curated
PLM4_65_coex_sep16_scaffold_2752_16
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13142..14035
DNA (894bp) protein (298aa)
Penicillin-binding protein 2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
penicillin-binding protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_2752_17
GWA2_OD1_41_22_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14047..14757
DNA (711bp) protein (237aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:KKS01704.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_41_22.;"
Penicillin-binding protein 2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PLM4_65_coex_sep16_scaffold_2752_18
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14823..15284
DNA (462bp) protein (154aa)
transcription elongation factor GreA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
greA; transcription elongation factor GreA
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_2752_19
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

15409..16869
DNA (1461bp) protein (487aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
lysyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_2752_20
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16937..18223
DNA (1287bp) protein (429aa)
tai:Taci_1006 seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_2752_21
GWF2_OD1_43_596, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18223..19020
DNA (798bp) protein (266aa)
id=1947683 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKT15907.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWF2_43_596.;"
PLM4_65_coex_sep16_scaffold_2752_22
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19984..21765)
DNA (1782bp) protein (594aa)
Glycosyl transferase family 39 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
PLM4_65_coex_sep16_scaffold_2752_23
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21767..23332)
DNA (1566bp) protein (522aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036E7BB8
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
PLM4_65_coex_sep16_scaffold_2752_24
unknown

Not on your lists

23397..23792
DNA (396bp) protein (132aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2752_25
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23978..25069
DNA (1092bp) protein (364aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_2752_26
GWC1_OD1_39_29_partial, Parcubacteria, Bacteria

Not on your lists

25066..25668
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR14942.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_29.;"
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
GtrA family protein
PLM4_65_coex_sep16_scaffold_2752_27
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

25677..26429
DNA (753bp) protein (251aa)
DNA polymerase III, gamma and tau subunit bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA-directed DNA polymerase III
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
Displaying 27 items

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