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PLM4_65_coex_sep16_scaffold_4991

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4991_1
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3..1145
DNA (1143bp) protein (381aa)
Carboxyl-terminal protease bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_4991_2
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


1142..1588
DNA (447bp) protein (149aa)
50S ribosomal protein L9 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rplI; 50S ribosomal protein L9
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
PLM4_65_coex_sep16_scaffold_4991_3
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(1687..1965)
DNA (279bp) protein (93aa)
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpmA; 50S ribosomal protein L27
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
PLM4_65_coex_sep16_scaffold_4991_4
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2089..2616
DNA (528bp) protein (176aa)
DNA-specific endonuclease I (Modular protein) bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_5
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2655..3401)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XFZ3_9BACT
protein of unknown function DUF83
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_6
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3402..4070)
DNA (669bp) protein (223aa)
Putative PolB-like 3'-5' exonuclease bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PolB-like 3'-5' exonuclease
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_7
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4520..5764)
DNA (1245bp) protein (415aa)
Pyridine nucleotide-disulfide oxidoreductase family protein bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_8
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5764..7017)
DNA (1254bp) protein (418aa)
Metalloendopeptidase-like membrane protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
metalloendopeptidase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_9
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7014..8372)
DNA (1359bp) protein (453aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
PLM4_65_coex_sep16_scaffold_4991_10
unknown

Not on your lists

8514..8957
DNA (444bp) protein (148aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_11
GWE1_OD1_40_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9159..10271
DNA (1113bp) protein (371aa)
Primosomal protein N' bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Primosomal protein N {ECO:0000313|EMBL:KKR37286.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE1_40_10.;"
primosomal protein N
PLM4_65_coex_sep16_scaffold_4991_12
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10237..11007
DNA (771bp) protein (257aa)
Primosomal protein N' bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
helicase PriA
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
PLM4_65_coex_sep16_scaffold_4991_13
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11035..11496
DNA (462bp) protein (154aa)
Peptide deformylase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
def; peptide deformylase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_4991_14
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11721..12647
DNA (927bp) protein (309aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_4991_15
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12808..13383
DNA (576bp) protein (192aa)
Elongation factor P bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
elongation factor P
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_4991_16
unknown

Not on your lists

13515..13898
DNA (384bp) protein (128aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_17
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13994..14554)
DNA (561bp) protein (187aa)
id=2193206 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_4991_18
unknown

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comp(14607..14924)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_19
unknown

Not on your lists

comp(15179..15505)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_20
unknown

Not on your lists

comp(15706..16023)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_21
unknown

Not on your lists

comp(16175..16483)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_22
unknown

Not on your lists

comp(16563..16886)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_23
unknown

Not on your lists

comp(16896..17081)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_24
unknown

Not on your lists

comp(17140..17382)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_25
unknown

Not on your lists

comp(17357..17950)
DNA (594bp) protein (198aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_26
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(18111..18911)
DNA (801bp) protein (267aa)
Chaperone protein DnaJ bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chaperone protein DnaJ
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_4991_27
unknown

Not on your lists

18987..19301
DNA (315bp) protein (105aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4991_28
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19353..20378)
DNA (1026bp) protein (342aa)
Chaperone protein DnaK bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chaperone protein DnaK
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_4991_29
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21330..21785)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D9D64
grpE; DnaK co-chaperonin (Hsp70 cofactor)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_4991_30
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21788..22534)
DNA (747bp) protein (249aa)
Transcriptional regulator of heat shock gene bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Transcriptional regulator of heat shock protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
Displaying items 1-30 of 32 in total

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