name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_coex_sep16_scaffold_421_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..137)
|
Plasmid maintenance system antidote protein, XRE family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2V8_GEODF
XRE family transcriptional regulator
Antitoxin, XRE family {ECO:0000313|EMBL:ACM21304.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
|
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PLM4_65_coex_sep16_scaffold_421_trna_1
unknown
|
Not on your lists |
comp(326..399)
|
transferRNA Met
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PLM4_65_coex_sep16_scaffold_421_2
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(523..894)
|
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39XG5_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE03952.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
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PLM4_65_coex_sep16_scaffold_421_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(912..2117)
|
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase {ECO:0000313|EMBL:ABQ26561.1}; EC=5.4.2.- {ECO:0000313|EMBL:ABQ26561.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phosphoglycerate mutase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G443_GEOUR
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PLM4_65_coex_sep16_scaffold_421_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2151..3038)
|
Tyrosine recombinase XerD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G444_GEOUR
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
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PLM4_65_coex_sep16_scaffold_421_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3045..5747)
|
metal dependent phosphohydrolase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G445_GEOUR
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
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PLM4_65_coex_sep16_scaffold_421_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5869..7182)
|
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABQ26564.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABQ26564.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
N-acetylmuramoyl-L-alanine amidase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G446_GEOUR
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PLM4_65_coex_sep16_scaffold_421_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7185..9824)
|
DNA mismatch repair protein MutS Tax=Geobacter uraniireducens (strain Rf4) RepID=MUTS_GEOUR
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
DNA mismatch repair protein MutS
|
|
PLM4_65_coex_sep16_scaffold_421_8
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10019..10258
|
Transcriptional regulator, AbrB family Tax=Nitrosococcus oceani RepID=Q3J930_NITOC
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:KFI18967.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
|
|
PLM4_65_coex_sep16_scaffold_421_9
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10255..10692
|
PilT protein-like protein Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3J931_NITOC
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:KFI18966.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
|
|
PLM4_65_coex_sep16_scaffold_421_10 |
Not on your lists |
comp(10722..11267)
|
O-acetyl-ADP-ribose deacetylase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2Y0_PELCD
Uncharacterized protein {ECO:0000313|EMBL:KKL78658.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ymdB; O-acetyl-ADP-ribose deacetylase
|
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PLM4_65_coex_sep16_scaffold_421_11
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12011..12805)
|
Short-chain dehydrogenase/reductase SDR Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YLD4_METFJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFJ03727.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
|
|
PLM4_65_coex_sep16_scaffold_421_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13244..15505
|
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing Tax=Geobacter sulfurreducens RepID=D7AJD2_GEOSK
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing {ECO:0000313|EMBL:AAR35078.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
maeB; malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing
|
|
PLM4_65_coex_sep16_scaffold_421_13
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15520..16581
|
GMP reductase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3C4_GEODF
guanosine 5'-monophosphate oxidoreductase
Tax=GWD2_Desulfuromonadales_61_12_curated
|
|
PLM4_65_coex_sep16_scaffold_421_14
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16562..17335)
|
SAM-dependent methyltransferase Tax=Geobacter sulfurreducens RepID=D7AFW3_GEOSK
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIE41309.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
|
|
PLM4_65_coex_sep16_scaffold_421_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17296..19731)
|
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G808_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ABQ27926.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
hypothetical protein
|
|
PLM4_65_coex_sep16_scaffold_421_16
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19728..20948)
|
Glycosyl transferase group 1 Tax=Geobacter sp. (strain M18) RepID=E8WRX2_GEOS8
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADW12143.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
|
|
PLM4_65_coex_sep16_scaffold_421_17
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20945..22018)
|
Glycosyl transferase group 1 Tax=Geobacter sp. (strain M18) RepID=E8WKF5_GEOS8
group 1 glycosyl transferase
Tax=GWC2_Geobacteraceae_53_11_curated
|
|
PLM4_65_coex_sep16_scaffold_421_18
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22015..22812)
|
Glycosyl transferase family 2 Tax=Geobacter sp. (strain M21) RepID=C6E5U0_GEOSM
Putative glycosyltransferase Rv1514c {ECO:0000313|EMBL:GAM11004.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
family 2 glycosyl transferase
|
|
PLM4_65_coex_sep16_scaffold_421_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22892..24049)
|
Glycosyl transferase, group 1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G832_GEOUR
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ27950.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
|
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PLM4_65_coex_sep16_scaffold_421_20
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24122..25381)
|
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000367D07C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE04188.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
|
|
PLM4_65_coex_sep16_scaffold_421_21
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria
|
Not on your lists |
comp(25406..26092)
|
Methyltransferase family protein Tax=Chamaesiphon minutus PCC 6605 RepID=K9UMC6_9CHRO
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKS71184.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
methyltransferase family protein
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PLM4_65_coex_sep16_scaffold_421_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26107..27363)
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Polysaccharide biosynthesis protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G818_GEOUR
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABQ27936.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
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PLM4_65_coex_sep16_scaffold_421_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27547..28512)
|
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
GDP-mannose 4,6-dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G813_GEOUR
NAD-dependent epimerase/dehydratase
|
|
PLM4_65_coex_sep16_scaffold_421_24
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28509..29576)
|
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
GDP-L-fucose synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6F2_GEOUR
NAD-dependent epimerase/dehydratase
|
|
PLM4_65_coex_sep16_scaffold_421_25
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29530..30606)
|
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
GDP-mannose 4,6-dehydratase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8X9_GEODF
GDP-mannose 4,6-dehydratase
|
|
PLM4_65_coex_sep16_scaffold_421_26
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30652..31593)
|
Glycosyl transferase, group 1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G865_GEOUR
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ27983.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
|