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PLM4_65_coex_sep16_scaffold_1851

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1851_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1530
DNA (1530bp) protein (510aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Carbamoyl-phosphate synthase large chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF49_GEOUR
carbamoyl-phosphate synthase large subunit
PLM4_65_coex_sep16_scaffold_1851_2
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1624..2100
DNA (477bp) protein (159aa)
Transcription elongation factor GreA Tax=Geobacter sp. (strain M21) RepID=C6DZ47_GEOSM
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_1851_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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2172..3170
DNA (999bp) protein (333aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IPW6_9PLAN
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_65_coex_sep16_scaffold_1851_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3192..3683)
DNA (492bp) protein (164aa)
Inhibitor of MCP methylation-like protein bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
inhibitor of MCP methylation-like protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_1851_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4006..4395
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WT58_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW14258.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_1851_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4449..4823)
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEF5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25810.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1851_7
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4923..5771)
DNA (849bp) protein (283aa)
Response regulator receiver protein Tax=Geobacter sp. (strain M21) RepID=C6E807_GEOSM
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACT17995.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_1851_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5973..7289)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV9_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25964.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1851_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7289..8362)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25963.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1851_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8493..8717)
DNA (225bp) protein (75aa)
RNA-binding protein Hfq Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV7_GEOUR
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1851_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8710..9660)
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase 2 {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase 2 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT 2 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPTase 2 {ECO:0000255|HAMAP-Rule:MF_00185};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
tRNA dimethylallyltransferase 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=MIAA2_GEOUR
PLM4_65_coex_sep16_scaffold_1851_12
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9687..10577)
DNA (891bp) protein (297aa)
Putative esterase of the alpha-beta hydrolase superfamily bin=GWF2_Geobacter_54_21 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Patatin
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_1851_13
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10617..12875)
DNA (2259bp) protein (753aa)
Glycosyl transferase, family 51 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKF6_SYNFM
glycosyl transferase
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_65_coex_sep16_scaffold_1851_14
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12904..13407)
DNA (504bp) protein (168aa)
Large extracellular alpha-helical protein Tax=Beggiatoa alba B18LD RepID=I3CDR6_9GAMM
large extracellular alpha-helical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
Displaying 14 items

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