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PLM4_65_coex_sep16_scaffold_2062

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2062_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1..405
DNA (405bp) protein (135aa)
PilT protein-like protein bin=GWB2_Pelobacter_53_15 species=Acetobacter pasteurianus genus=Acetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
putative Plasmid stability protein stbB
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM4_65_coex_sep16_scaffold_2062_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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671..1273
DNA (603bp) protein (201aa)
GCN5-related N-acetyltransferase bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
GCN5-related N-acetyltransferase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_65_coex_sep16_scaffold_2062_3
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1499..2143)
DNA (645bp) protein (215aa)
Hopanoid biosynthesis associated membrane protein HpnM Tax=Desulfovibrio africanus PCS RepID=M5PXQ0_DESAF
hopanoid biosynthesis associated membrane protein HpnM
Hopanoid biosynthesis associated membrane protein HpnM {ECO:0000313|EMBL:EMG39077.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
PLM4_65_coex_sep16_scaffold_2062_4
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2247..4889
DNA (2643bp) protein (881aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003632A78
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM4_65_coex_sep16_scaffold_2062_5
unknown

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5127..5669
DNA (543bp) protein (181aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2062_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5880..6566)
DNA (687bp) protein (229aa)
Zinc metalloendopeptidase, M23 family Tax=Geobacter metallireducens RepID=Q39R97_GEOMG
zinc metalloendopeptidase
Zinc metalloendopeptidase, M23 family {ECO:0000313|EMBL:ABB33227.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_2062_7
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7007..7402
DNA (396bp) protein (132aa)
Signal transduction inhibitor Tax=Synechococcus RepID=Q31MX6_SYNE7
ornithine acetyltransferase
Signal transduction inhibitor {ECO:0000313|EMBL:ABB57593.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
PLM4_65_coex_sep16_scaffold_2062_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7580..7819
DNA (240bp) protein (80aa)
Prevent-host-death family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4B7_GEOUR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABQ26635.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2062_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7893..8192
DNA (300bp) protein (100aa)
PilT protein domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4B6_GEOUR
PilT domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ABQ26634.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2062_10
unknown

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8237..8416
DNA (180bp) protein (60aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2062_11
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8497..8781
DNA (285bp) protein (95aa)
Histone family protein DNA-binding protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAY3_GEOLS
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACD93967.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_coex_sep16_scaffold_2062_12
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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8930..10021
DNA (1092bp) protein (364aa)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQH0_KORVE
UDP-N-acetylmuramate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
PLM4_65_coex_sep16_scaffold_2062_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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10067..10579
DNA (513bp) protein (171aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
PLM4_65_coex_sep16_scaffold_2062_14
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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10743..10973
DNA (231bp) protein (77aa)
Lipoprotein, putative bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Spirochaetes_49_21_curated
PLM4_65_coex_sep16_scaffold_2062_15
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11103..11387
DNA (285bp) protein (95aa)
Histone family protein DNA-binding protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAY3_GEOLS
histone family protein DNA-binding protein
Tax=GWC2_Geobacteraceae_48_7_curated
PLM4_65_coex_sep16_scaffold_2062_16
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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11641..12222
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
TetR family transcriptional regulator
Tax=GWF2_Nitrospirae_44_13_curated
PLM4_65_coex_sep16_scaffold_2062_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12219..12659
DNA (441bp) protein (147aa)
Outer membrane efflux protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAQ9_GEOUR
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABQ25331.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 17 items

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