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PLM4_65_coex_sep16_scaffold_5170

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5170_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1080)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEA9_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25764.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5170_2
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1456..1725
DNA (270bp) protein (90aa)
DNA-damage-inducible protein D bin=GWB2_Pelobacter_53_15 species=Acidithiobacillus sp. GGI-221 genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_5170_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1784..1993
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24768.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5170_4
unknown

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2008..2106
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5170_5
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2213..2539)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM09484.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM4_65_coex_sep16_scaffold_5170_6
unknown

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2951..3394
DNA (444bp) protein (148aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5170_trna_1
unknown

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comp(3097..3190)
DNA (94bp)
transferRNA SeC(p)
PLM4_65_coex_sep16_scaffold_5170_7
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3407..4315)
DNA (909bp) protein (303aa)
Helix-turn-helix transcriptional regulator, LysR family Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A6B9_PELCD
LysR family transcriptional regulator
Helix-turn-helix transcriptional regulator, LysR family {ECO:0000313|EMBL:ABA88088.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM4_65_coex_sep16_scaffold_5170_8
CG_ACD39_01, ACD39, Bacteria

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4429..5064
DNA (636bp) protein (212aa)
Selenium metabolism protein YedF bin=GWC2_ACD39_50_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
selenium metabolism protein YedF
Tax=CG_ACD39_01
PLM4_65_coex_sep16_scaffold_5170_9
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

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5211..6473
DNA (1263bp) protein (421aa)
selenide water dikinase bin=GWC2_ACD39_50_8 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_ACD39_50_8 organism_group=ACD39
selD; selenide, water dikinase
Tax=BJP_IG2102_ACD39_51_10
PLM4_65_coex_sep16_scaffold_5170_10
CG_Nitrosp_01, Nitrospirae, Bacteria

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6927..7538
DNA (612bp) protein (204aa)
Formate dehydrogenase (Quinone-dependent) catalytic subunit bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
formate dehydrogenase subunit alpha
Tax=CG_Nitrosp_01
Displaying 11 items

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