ggKbase home page

PLM4_65_coex_sep16_scaffold_12508

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_12508_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..518
DNA (516bp) protein (172aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCP6_GEOUR
molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB {ECO:0000313|EMBL:ABQ24644.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12508_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..792
DNA (228bp) protein (76aa)
Gsl3556 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFG9_GLOVI
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_12508_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

792..1181
DNA (390bp) protein (130aa)
Gll3555 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFH0_GLOVI
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_12508_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1342..2745
DNA (1404bp) protein (468aa)
NLP/P60 protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA07_GEOUR
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ABQ25598.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12508_5
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2912..3664)
DNA (753bp) protein (251aa)
23S rRNA (2'-O-methyl-G2251)-methyltransferase Tax=Geobacter metallireducens RepID=Q39VY4_GEOMG
rlmB; 23S rRNA (2'-O-methyl-G2251)-methyltransferase
23S rRNA (2'-O-methyl-G2251)-methyltransferase {ECO:0000313|EMBL:ABB31590.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12508_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3908..4534)
DNA (627bp) protein (209aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255|HAMAP-Rule:MF_01200};; Short=OMPdecase {ECO:0000255|HAMAP-Rule:MF_01200};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Orotidine 5'-phosphate decarboxylase Tax=Geobacter uraniireducens (strain Rf4) RepID=PYRF_GEOUR
PLM4_65_coex_sep16_scaffold_12508_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4703..6415)
DNA (1713bp) protein (571aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Proline--tRNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5A3_GEOUR
Displaying 7 items

View Taxonomy