ggKbase home page

PLM4_65_coex_sep16_scaffold_3642

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3642_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8U6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28214.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1522)
DNA (1092bp) protein (364aa)
Aminodeoxychorismate lyase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7K4_GEOUR
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABQ27772.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1519..2103)
DNA (585bp) protein (195aa)
Glycerol-3-phosphate acyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8F2_GEOUR
membrane protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2293..3345)
DNA (1053bp) protein (351aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC61_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24844.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_5
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3350..4396)
DNA (1047bp) protein (349aa)
Membrane protein, UPF0118 superfamily Tax=Geobacter sulfurreducens RepID=D7AK52_GEOSK
Membrane protein {ECO:0000313|EMBL:KIE41669.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_3642_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4550..4990)
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC44_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24846.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5075..5800
DNA (726bp) protein (242aa)
Metallophosphoesterase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC45_GEOUR
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABQ24847.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5813..6043)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74B28_GEOSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAR35830.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM4_65_coex_sep16_scaffold_3642_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6260..7603)
DNA (1344bp) protein (448aa)
Penicillin-binding protein, transpeptidase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC47_GEOUR
penicillin-binding protein, transpeptidase
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:ABQ24849.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..9092)
DNA (1362bp) protein (454aa)
tRNA-processing RNAse BN {ECO:0000313|EMBL:ABQ24850.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABQ24850.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
tRNA-processing RNAse BN Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC48_GEOUR
putative ribonuclease BN
PLM4_65_coex_sep16_scaffold_3642_11
unknown

Not on your lists

comp(9128..9226)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3642_12
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9223..9414)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E406_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD94420.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_coex_sep16_scaffold_3642_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9416..9808)
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC50_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24852.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3642_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10047..11219
DNA (1173bp) protein (391aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase {ECO:0000255|HAMAP-Rule:MF_01693}; Short=AONS {ECO:0000255|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000255|HAMAP-Rule:MF_01693};; 7-keto-8-amino-pelargonic acid synthase {ECO:0000255|HAMAP-Rule:MF_01693}; Short=7-KAP synthase {ECO:0000255|HAMAP-Rule:MF_01693};; Short=KAPA synthase;; 8-amino-7-ketopelargonate synthase {ECO:0000255|HAMAP-Rule:MF_01693}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
8-amino-7-oxononanoate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=BIOF_GEOUR
PLM4_65_coex_sep16_scaffold_3642_15
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11505..12329
DNA (825bp) protein (275aa)
Alpha/beta hydrolase fold protein Tax=Geobacter sp. (strain M21) RepID=C6E5C9_GEOSM
alpha/beta hydrolase fold protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_3642_16
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12316..13137
DNA (822bp) protein (274aa)
Malonyl-[acyl-carrier protein] O-methyltransferase Tax=Geobacter sp. (strain M21) RepID=C6E5C8_GEOSM
methyltransferase type 11
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_3642_17
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13205..14380)
DNA (1176bp) protein (392aa)
SAM-dependent methyltransferase, PUA domain-containing Tax=Geobacter metallireducens RepID=Q39XD7_GEOMG
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJE02586.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_3642_18
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14456..14740)
DNA (285bp) protein (95aa)
Helix-turn-helix transcriptional regulator, ArsR family Tax=Geobacter sulfurreducens RepID=D7AL00_GEOSK
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIE41521.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
PLM4_65_coex_sep16_scaffold_3642_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14822..15709)
DNA (888bp) protein (296aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ1_GEOUR
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABQ25906.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 19 items

View Taxonomy