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PLM4_65_coex_sep16_scaffold_4064

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4064_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1175
DNA (1173bp) protein (391aa)
protease Do (EC:3.4.21.107)
Protease Do Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZ44_GEODF
Periplasmic trypsin-like serine protease DegP {ECO:0000313|EMBL:ACM18776.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_4064_2
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1202..2695
DNA (1494bp) protein (498aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Probable cytosol aminopeptidase Tax=Geobacter uraniireducens (strain Rf4) RepID=AMPA_GEOUR
peptidase M17
PLM4_65_coex_sep16_scaffold_4064_3
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2750..3025)
DNA (276bp) protein (92aa)
ATP synthase F0 subunit C
ATP synthase subunit c 2 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=GWC2_Geobacteraceae_48_7_curated
PLM4_65_coex_sep16_scaffold_4064_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3086..3814)
DNA (729bp) protein (243aa)
ATP synthase subunit a Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=ATP6_GEODF
ATP synthase F0 subunit A
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_4064_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3820..4206)
DNA (387bp) protein (129aa)
ATP synthase-associated magnesium import membrane protein AtpI Tax=Geobacter sulfurreducens RepID=D7AE82_GEOSK
atpI; ATP synthase-associated magnesium import membrane protein AtpI
ATP synthase-associated magnesium import membrane protein AtpI {ECO:0000313|EMBL:AAR33668.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM4_65_coex_sep16_scaffold_4064_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4184..4423)
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9C1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28389.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4064_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4581..5864)
DNA (1284bp) protein (428aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT {ECO:0000255|HAMAP-Rule:MF_00375};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Geobacter uraniireducens (strain Rf4) RepID=GSA_GEOUR
glutamate-1-semialdehyde aminotransferase
PLM4_65_coex_sep16_scaffold_4064_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6210..6566
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
NADH-quinone oxidoreductase subunit A 2 Tax=Geobacter RepID=NUOA2_GEOBB
NADH-quinone oxidoreductase
PLM4_65_coex_sep16_scaffold_4064_9
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6557..7069
DNA (513bp) protein (171aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
NADH-quinone oxidoreductase subunit B Tax=Geobacter sp. (strain M18) RepID=E8WJB1_GEOS8
PLM4_65_coex_sep16_scaffold_4064_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7111..7596
DNA (486bp) protein (162aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
NADH-quinone oxidoreductase subunit C Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZL9_GEODF
PLM4_65_coex_sep16_scaffold_4064_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7596..7940
DNA (345bp) protein (115aa)
NADH-quinone oxidoreductase subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
NADH-quinone oxidoreductase subunit D Tax=Geobacter metallireducens RepID=NUOD_GEOMG
nuoD; NADH dehydrogenase I subunit D
PLM4_65_coex_sep16_scaffold_4064_12
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7927..8688
DNA (762bp) protein (254aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
NADH-quinone oxidoreductase subunit D Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZM0_GEODF
PLM4_65_coex_sep16_scaffold_4064_13
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8708..9256
DNA (549bp) protein (183aa)
NADH-quinone oxidoreductase, E subunit Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZM1_GEODF
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AJE04959.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_4064_14
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9253..11034
DNA (1782bp) protein (594aa)
NADH dehydrogenase I, F subunit Tax=Geobacter sulfurreducens RepID=D7AE90_GEOSK
NADH dehydrogenase {ECO:0000313|EMBL:KIE44019.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
nuoF-1; NADH dehydrogenase I subunit F
PLM4_65_coex_sep16_scaffold_4064_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11055..13547
DNA (2493bp) protein (831aa)
NADH dehydrogenase I, G subunit Tax=Geobacter sulfurreducens RepID=D7AE91_GEOSK
NADH dehydrogenase I, G subunit {ECO:0000313|EMBL:AAR33677.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
nuoG-1; NADH dehydrogenase I subunit G
PLM4_65_coex_sep16_scaffold_4064_16
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13569..14606
DNA (1038bp) protein (346aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
NADH-quinone oxidoreductase subunit H Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9B2_GEOUR
NADH-quinone oxidoreductase
PLM4_65_coex_sep16_scaffold_4064_17
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14762..15169
DNA (408bp) protein (136aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
NADH-quinone oxidoreductase subunit I Tax=Geobacter sp. (strain M18) RepID=E8WJA4_GEOS8
NADH-quinone oxidoreductase subunit I
PLM4_65_coex_sep16_scaffold_4064_18
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15267..15773
DNA (507bp) protein (169aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tax=Geobacter sp. (strain M21) RepID=C6E8M6_GEOSM
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:ACT20017.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_4064_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15790..16092
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K 2 {ECO:0000255|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K 2 {ECO:0000255|HAMAP-Rule:MF_01456}; NDH-1 subunit K 2 {ECO:0000255|HAMAP-Rule:MF_01456}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
NADH-quinone oxidoreductase subunit K 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=NUOK2_GEOUR
NADH-ubiquinone oxidoreductase subunit 4L
PLM4_65_coex_sep16_scaffold_4064_20
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16228..16377
DNA (150bp) protein (50aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH dehydrogenase subunit L bin=GWB2_Pelobacter_53_15 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWD2_Desulfuromonadales_54_10_curated
Displaying 20 items

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