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PLM4_65_coex_sep16_scaffold_4213

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4213_1
unknown

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2..73
DNA (72bp) protein (24aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4213_2
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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604..2904
DNA (2301bp) protein (767aa)
FecR domain protein bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_65_coex_sep16_scaffold_4213_3
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(2934..3392)
DNA (459bp) protein (153aa)
UPI0003D1C67F related cluster Tax=unknown RepID=UPI0003D1C67F
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_65_coex_sep16_scaffold_4213_4
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3632..4123)
DNA (492bp) protein (164aa)
esterase Tax=Variovorax paradoxus RepID=UPI00036CD6AC
alpha/beta hydrolase fold-containing protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_4213_5
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4120..5076)
DNA (957bp) protein (319aa)
Protoheme IX farnesyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
UbiA prenyltransferase
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_4213_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5037..5894)
DNA (858bp) protein (286aa)
Cytochrome oxidase assembly Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCT2_GEOUR
cytochrome oxidase assembly
Cytochrome oxidase assembly {ECO:0000313|EMBL:ABQ24621.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6034..6297)
DNA (264bp) protein (88aa)
Caa(3)-type oxidase, subunit IV Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCR5_GEOUR
caa(3)-type oxidase subunit IV
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:ABQ24622.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6322..6930)
DNA (609bp) protein (203aa)
Cytochrome c oxidase, subunit III Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCR6_GEOUR
cytochrome c oxidase subunit III
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:ABQ24623.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6944..8560)
DNA (1617bp) protein (539aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase {ECO:0000313|EMBL:ABQ24624.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABQ24624.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Cytochrome-c oxidase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCR7_GEOUR
PLM4_65_coex_sep16_scaffold_4213_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8609..9553)
DNA (945bp) protein (315aa)
Cytochrome C oxidase subunit II, transmembrane region Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCS3_GEOUR
cytochrome C oxidase subunit II, transmembrane region
Cytochrome C oxidase subunit II, transmembrane region {ECO:0000313|EMBL:ABQ24630.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9565..10419)
DNA (855bp) protein (285aa)
Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCS4_GEOUR
hypothetical protein
Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems-like protein {ECO:0000313|EMBL:ABQ24631.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10690..10935
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM11473.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
PLM4_65_coex_sep16_scaffold_4213_13
unknown

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comp(11053..11394)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4213_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11464..12012)
DNA (549bp) protein (183aa)
Pseudouridine synthase, RluA family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDE8_GEOUR
RluA family pseudouridine synthase
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:ABQ24391.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_15
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11997..12320)
DNA (324bp) protein (108aa)
RNA pseudouridine synthase, RluA family Tax=Geobacter metallireducens RepID=Q39ZM7_GEOMG
RNA pseudouridine synthase, RluA family
RNA pseudouridine synthase, RluA family {ECO:0000313|EMBL:ABB30297.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_4213_16
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12317..12838)
DNA (522bp) protein (174aa)
ADP-ribose pyrophosphatase Tax=Geobacter metallireducens RepID=Q39ZM6_GEOMG
nudF; ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:ABB30298.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_4213_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12993..13214
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDF0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24393.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4213_18
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13353..13490
DNA (138bp) protein (46aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Peptidyl-prolyl cis-trans isomerase Tax=Geobacter sp. (strain M18) RepID=E8WQA4_GEOS8
FKBP-type peptidylprolyl isomerase
Displaying 18 items

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