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PLM4_65_coex_sep16_scaffold_4609

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4609_1
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
Uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_4609_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

627..992
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YBF5_9DELT
hypothetical protein
Tax=CG_Delta_05
PLM4_65_coex_sep16_scaffold_4609_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1010..2032
DNA (1023bp) protein (341aa)
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ompA2; outer membrane protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_4609_4
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2361..3431
DNA (1071bp) protein (357aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003670905
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_4609_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3790..3969
DNA (180bp) protein (60aa)
CsbD family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G466_GEOUR
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:ABQ26584.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4609_6
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4115..4873
DNA (759bp) protein (253aa)
Transport-associated bin=GWC2_Geobacteraceae_55_20 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
transport-associated protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM4_65_coex_sep16_scaffold_4609_7
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4930..5412
DNA (483bp) protein (161aa)
PF07480 domain protein bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
putative uncharacterized protein
Tax=RBG_16_Deltaproteobacteria_44_11_curated
PLM4_65_coex_sep16_scaffold_4609_8
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5497..5841
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5BZ15_9GAMM
Tax=RBG_16_Deltaproteobacteria_44_11_curated
PLM4_65_coex_sep16_scaffold_4609_9
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6583..6738
DNA (156bp) protein (52aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WII8_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW14592.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_4609_10
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6749..7204
DNA (456bp) protein (152aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000379B910
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
PLM4_65_coex_sep16_scaffold_4609_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7255..7542
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39WI7_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31387.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_4609_12
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7617..7766
DNA (150bp) protein (50aa)
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
PLM4_65_coex_sep16_scaffold_4609_13
unknown

Not on your lists

comp(7897..8070)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4609_14
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8070..11408)
DNA (3339bp) protein (1113aa)
Trehalose synthase bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
trehalose synthase
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_4609_15
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11398..12906)
DNA (1509bp) protein (503aa)
4-alpha-glucanotransferase bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
4-alpha-glucanotransferase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4609_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13097..14326)
DNA (1230bp) protein (410aa)
Maltooligosyl trehalose synthase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
maltooligosyl trehalose synthase
Tax=GWC2_Geobacteraceae_55_20_curated
Displaying 16 items

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