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PLM4_65_coex_sep16_scaffold_20458

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_20458_1

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comp(3..677)
DNA (675bp) protein (225aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000374B8AB
Uncharacterized protein {ECO:0000313|EMBL:KKL99026.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
beta-lactamase
PLM4_65_coex_sep16_scaffold_20458_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(720..1427)
DNA (708bp) protein (236aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein bin=GWC2_Syntrophus__56_31 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
ABC transporter-like protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM4_65_coex_sep16_scaffold_20458_3
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1440..2189)
DNA (750bp) protein (250aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IC44_BORPD
branched-chain amino acid ABC transporter ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP41521.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
PLM4_65_coex_sep16_scaffold_20458_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2255..2521
DNA (267bp) protein (89aa)
Acyl-CoA dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_20458_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2514..3071
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_20458_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3059..3427
DNA (369bp) protein (123aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Ochrobactrum sp. CDB2 genus=Ochrobactrum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 6 items

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