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PLM4_65_coex_sep16_scaffold_21384

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_21384_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(358..765)
DNA (408bp) protein (136aa)
transposase IS1533 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptospira santarosai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transposase
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_coex_sep16_scaffold_21384_2
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(762..1334)
DNA (573bp) protein (191aa)
Transposase Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=H7E245_DESAJ
Transposase {ECO:0000313|EMBL:EWG10358.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
transposase
PLM4_65_coex_sep16_scaffold_21384_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1449..2423)
DNA (975bp) protein (325aa)
Isocitrate lyase bin=GWC2_Methylomirabilis_70_16 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
isocitrate lyase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_21384_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2447..2638)
DNA (192bp) protein (64aa)
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_21384_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2823..3752
DNA (930bp) protein (310aa)
LysR family transcriptional regulator bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_21384_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3754..4068)
DNA (315bp) protein (105aa)
Phosphoesterase PA-phosphatase related protein bin=GWA2_Methylomirabilis_73_35 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PA-phosphatase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 6 items

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