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PLM4_65_coex_sep16_scaffold_4933

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4933_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
amidohydrolase Tax=Streptomyces sp. HmicA12 RepID=UPI00037AAA26
Uncharacterized protein {ECO:0000313|EMBL:ETX05673.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase
PLM4_65_coex_sep16_scaffold_4933_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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225..1592
DNA (1368bp) protein (456aa)
adenylosuccinate lyase Tax=Rhodococcus opacus RepID=UPI00029CD27D
Uncharacterized protein {ECO:0000313|EMBL:ETW94146.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Adenylosuccinate lyase
PLM4_65_coex_sep16_scaffold_4933_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1589..1792
DNA (204bp) protein (68aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4933_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1848..2273
DNA (426bp) protein (142aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_4933_5
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3244..3582)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKG3_9BACT
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_65_coex_sep16_scaffold_4933_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3877..4092)
DNA (216bp) protein (72aa)
Integrase family protein bin=GWC2_Methylomirabilis_70_16 species=Streptomyces flavogriseus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_4933_7
unknown

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comp(4162..4332)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4933_8
bacterium UASB270, Bacteria

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comp(4452..5396)
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase Tax=Holophaga foetida DSM 6591 RepID=H1P2G3_9BACT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:GAK57338.1}; species="Bacteria.;" source="bacterium UASB270.;"
ribose-phosphate pyrophosphokinase
PLM4_65_coex_sep16_scaffold_4933_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5514..6584)
DNA (1071bp) protein (357aa)
beta-lactamase domain-containing protein; K06897 bin=bin3_NC10 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_4933_10
unknown

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comp(6803..7969)
DNA (1167bp) protein (389aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4933_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8049..8423)
DNA (375bp) protein (125aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_coex_sep16_scaffold_4933_12
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8407..8643)
DNA (237bp) protein (79aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_65_coex_sep16_scaffold_4933_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10083..10304)
DNA (222bp) protein (74aa)
Integron integrase bin=GWF2_Methylomirabilis_70_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
site-specific recombinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_4933_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10301..10924)
DNA (624bp) protein (208aa)
Integron integrase bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integron integrase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_4933_15
unknown

Not on your lists

comp(11283..11429)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4933_16
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11550..12248)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00037F5956
Amidohydrolase {ECO:0000313|EMBL:ETB35786.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 10-5606.;"
amidohydrolase
PLM4_65_coex_sep16_scaffold_4933_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12265..13035)
DNA (771bp) protein (257aa)
short chain dehydrogenase/reductase (EC:1.1.1.1)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI000374089B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_4933_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..13347
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PKA4_9ZZZZ
Polysaccharide deacetylase {ECO:0000313|EMBL:ETX00346.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
polysaccharide deacetylase
Displaying 18 items

View Taxonomy