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PLM4_65_coex_sep16_scaffold_46100

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_46100_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..427)
DNA (426bp) protein (142aa)
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma factor RpoE
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_46100_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(431..979)
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_46100_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(979..1341)
DNA (363bp) protein (121aa)
Dihydroneopterin aldolase bin=GWA2_Methylomirabilis_73_35 species=Streptococcus ictaluri genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroneopterin aldolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_46100_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1338..2096)
DNA (759bp) protein (253aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
2-keto-4-pentenoate hydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_46100_5
unknown

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2435..2740
DNA (306bp) protein (102aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_46100_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2906..3571)
DNA (666bp) protein (222aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 6 items

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