ggKbase home page

PLM4_65_coex_sep16_scaffold_1747

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1747_1
unknown

Not on your lists

2..409
DNA (408bp) protein (136aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1747_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

409..1902
DNA (1494bp) protein (498aa)
Putative polysaccharide biosynthesis protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V2_GEMAT
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG90016.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_coex_sep16_scaffold_1747_3
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(2058..2933)
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PA60_DESSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM4_65_coex_sep16_scaffold_1747_4
unknown

Not on your lists

comp(2963..3193)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1747_5
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3572..4768)
DNA (1197bp) protein (399aa)
hydroxyglutarate oxidase Tax=Gemmata obscuriglobus RepID=UPI00016C4B24
putative oxidoreductase
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_65_coex_sep16_scaffold_1747_6
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5017..5580
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGM6_9BRAD
dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM4_65_coex_sep16_scaffold_1747_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5648..6982
DNA (1335bp) protein (445aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5BJ84_9GAMM
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:AJY68205.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
oxidoreductase domain protein
PLM4_65_coex_sep16_scaffold_1747_8
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7168..8217
DNA (1050bp) protein (350aa)
NAD-dependent epimerase/dehydratase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NM19_MARHT
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEB11489.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
PLM4_65_coex_sep16_scaffold_1747_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8242..9036
DNA (795bp) protein (265aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase Tax=planctomycete KSU-1 RepID=I3INK6_9PLAN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_coex_sep16_scaffold_1747_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..9726
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYG2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ01336.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_coex_sep16_scaffold_1747_11
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9734..11917
DNA (2184bp) protein (728aa)
UPI0003CF1F57 related cluster Tax=unknown RepID=UPI0003CF1F57
Uncharacterized protein {ECO:0000313|EMBL:ESY89769.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
pyrrolo-quinoline quinone
PLM4_65_coex_sep16_scaffold_1747_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11969..12973
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0003710FAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88849.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM4_65_coex_sep16_scaffold_1747_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13015..13893
DNA (879bp) protein (293aa)
Glycosyltransferase Tax=planctomycete KSU-1 RepID=I3INL0_9PLAN
Glycosyltransferase {ECO:0000313|EMBL:GAB63305.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
probable glycosyl transferase
PLM4_65_coex_sep16_scaffold_1747_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14018..15076
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XNH3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33320.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_coex_sep16_scaffold_1747_15
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15080..16255
DNA (1176bp) protein (392aa)
Glycosyl transferase family protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GVA0_THISH
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:ACL73446.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM4_65_coex_sep16_scaffold_1747_16
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16428..17822)
DNA (1395bp) protein (465aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
PLM4_65_coex_sep16_scaffold_1747_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17843..18985)
DNA (1143bp) protein (381aa)
Heparinase II/III-like Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220X2_RHOFD
heparinase II/III-like protein
Heparinase II/III-like {ECO:0000313|EMBL:ABD68431.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Displaying 17 items

View Taxonomy