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PLM4_65_coex_sep16_scaffold_21169

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_21169_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1..1140)
DNA (1140bp) protein (380aa)
Integral membrane sensor signal transduction histidine kinase bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
sensor histidine kinase, HAMP domain-containing, putative heme-binding site
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cytochrome ? 1 CxxCH motif Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1258..1917)
DNA (660bp) protein (220aa)
Glutamate synthase (NADPH), homotetrameric Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07NE4_RHOP5
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_21169_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2036..2674)
DNA (639bp) protein (213aa)
nfnA; NfnA (EC:1.4.1.13 1.4.1.14)
NADPH-dependent glutamate synthase Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLN6_CLOSH
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_21169_4
R_NC10_66_22, NC10, Bacteria

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comp(2646..3539)
DNA (894bp) protein (298aa)
gltA; oxidoreductase (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AAM4_CARHZ
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_21169_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3603..4460)
DNA (858bp) protein (286aa)
Glutamate synthase (NADPH), homotetrameric Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE03_ANADF
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_21169_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4622..5422)
DNA (801bp) protein (267aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MHC with 5 heme-bindng motifs Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5362..6777)
DNA (1416bp) protein (472aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MHC with 11 CxxCH heme-binding motifs Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_8
R_NC10_66_22, NC10, Bacteria

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comp(6876..8054)
DNA (1179bp) protein (393aa)
hypothetical protein bin=bin5_DeltaP species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MHC with 9 CxxCH heme-binding motifs Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8507..8938)
DNA (432bp) protein (144aa)
Hypothetical conserved protein bin=GWC2_Deltaproteobacteria_66_88 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Cytochrome b(N-terminal)/b6/petB
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
No domain but hits to cytb/b6 Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_10
unknown

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9102..9689
DNA (588bp) protein (196aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_21169_11
R_NC10_66_22, NC10, Bacteria

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comp(9575..10627)
DNA (1053bp) protein (351aa)
Formate dehydrogenase-like protein cytochrome b subunit bin=GWC2_Deltaproteobacteria_66_88 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
cytochrome b subunit of formate dehydrogenase-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
9 CxxCH heme-binding motifs Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10614..11321)
DNA (708bp) protein (236aa)
Deca-heme C-type cytochrome bin=GWC2_Deltaproteobacteria_66_88 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Cytochrome b subunit of formate dehydrogenase-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
No CxxCH Heme-binding motifs Jill Banfield (2/11/22)
PLM4_65_coex_sep16_scaffold_21169_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11321..12343)
DNA (1023bp) protein (341aa)
Formate dehydrogenase-like protein cytochrome b subunit bin=GWB2_Deltaproteobacteria_65_81 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Cytochrome b subunit of formate dehydrogenase-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MHC with 9 heme-binding motifs Jill Banfield (2/11/22)
Displaying 13 items

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