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PLM4_65_coex_sep16_scaffold_2879

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2879_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..649
DNA (648bp) protein (216aa)
nadE; NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000255|HAMAP-Rule:MF_00193}; EC=6.3.1.5 {ECO:0000255|HAMAP-Rule:MF_00193};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
NH(3)-dependent NAD(+) synthetase Tax=Geobacter uraniireducens (strain Rf4) RepID=NADE_GEOUR
PLM4_65_coex_sep16_scaffold_2879_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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705..1652
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Ribosomal RNA small subunit methyltransferase I Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5A1_GEODF
uroporphyrin-III C/tetrapyrrole methyltransferase
PLM4_65_coex_sep16_scaffold_2879_3
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1756..3117
DNA (1362bp) protein (454aa)
Uncharacterized protein Tax=Geobacter sulfurreducens RepID=D7AI89_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KIE42675.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_2879_4
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3109..3444)
DNA (336bp) protein (112aa)
Export-related chaperone CsaA Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBC0_GEOBB
export-like chaperone CsaA
Export-related chaperone CsaA {ECO:0000313|EMBL:ACH40412.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM4_65_coex_sep16_scaffold_2879_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3510..5099)
DNA (1590bp) protein (530aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000255|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PGI {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphohexose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PHI {ECO:0000255|HAMAP-Rule:MF_00473};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glucose-6-phosphate isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=G6PI_GEOUR
PLM4_65_coex_sep16_scaffold_2879_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5172..6128)
DNA (957bp) protein (319aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7Y6_GEOUR
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ27904.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2879_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6177..6920)
DNA (744bp) protein (248aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7Y5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27903.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2879_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7001..7630)
DNA (630bp) protein (210aa)
Putative prophage repressor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7Y1_GEOUR
putative prophage repressor
Putative prophage repressor {ECO:0000313|EMBL:ABQ27899.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2879_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7996..10038
DNA (2043bp) protein (681aa)
Diguanylate cyclase with GAF sensor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7Y0_GEOUR
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABQ27898.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
diguanylate cyclase
PLM4_65_coex_sep16_scaffold_2879_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10266..10550
DNA (285bp) protein (95aa)
Polyprenyl synthetase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7X8_GEOUR
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ABQ27896.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 10 items

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