ggKbase home page

PLM4_65_coex_sep16_scaffold_4361

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4361_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1021)
DNA (1020bp) protein (340aa)
C4-dicarboxylate transport protein bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
sodium:dicarboxylate symporter
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4361_2
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1072..1275)
DNA (204bp) protein (68aa)
id=2911661 bin=GWF2_Geobacter_54_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4361_3
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1637..3073)
DNA (1437bp) protein (479aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
two component sigma-54 specific Fis family transcriptional regulator
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4361_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3070..4836)
DNA (1767bp) protein (589aa)
Periplasmic substrate-binding histidine kinase bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
integral membrane sensor signal transduction histidine kinase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4361_5
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4930..5274)
DNA (345bp) protein (115aa)
Histidine triad (HIT) protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G927_GEOUR
Histidine triad nucleotide-binding protein 1 {ECO:0000313|EMBL:GAM11100.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
histidine triad (HIT) protein
PLM4_65_coex_sep16_scaffold_4361_6
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5295..5951)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AS18_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL00139.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
NCBI: Methyltransferase 32 (unknown radical SAM-dependent methyltransferase) Jacob West-Roberts (9/15/22)
PLM4_65_coex_sep16_scaffold_4361_7
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6127..6789
DNA (663bp) protein (221aa)
Isochorismatase hydrolase bin=GWF2_Geobacter_54_21 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
isochorismatase hydrolase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_4361_8
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7010..7393)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN09_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK98729.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_4361_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7527..8165)
DNA (639bp) protein (213aa)
Filamentation induced by cAMP protein Fic bin=GWC2_OP3-like_45_7 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_coex_sep16_scaffold_4361_10
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..8382)
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A0R809_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL01275.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Displaying 10 items

View Taxonomy