ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_27137

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_27137_1
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(176..1417)
DNA (1242bp) protein (414aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036FA3FA
diaminopimelate decarboxylase
Tax=S_Thermoanaerobacterales_50_218
PLM0_60_coex_redo_sep16_scaffold_27137_2
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1708..2337
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G Tax=Roseiflexus sp. (strain RS-1) RepID=RSMG_ROSS1
gidB; 16S rRNA methyltransferase GidB
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM0_60_coex_redo_sep16_scaffold_27137_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2341..3201)
DNA (861bp) protein (287aa)
Phosphate ABC transporter, permease protein PstA Tax=Melioribacter roseus (strain P3M) RepID=I7A3S9_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
phosphate ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM0_60_coex_redo_sep16_scaffold_27137_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3198..3491)
DNA (294bp) protein (98aa)
phosphate ABC transporter membrane protein
Phosphate ABC transporter membrane protein 1, PhoT family bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 4 items

View Taxonomy