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PLM0_60_coex_redo_sep16_scaffold_439

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_439_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..711)
DNA (711bp) protein (237aa)
Monosaccharide ABC transporter membrane protein, CUT2 family Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HX3_MESSB
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABG63002.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
PLM0_60_coex_redo_sep16_scaffold_439_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(711..1709)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI0003661D77
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EJJ28577.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
inner-membrane translocator
PLM0_60_coex_redo_sep16_scaffold_439_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1681..2802)
DNA (1122bp) protein (374aa)
Mandelate racemase/muconate lactonizing protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGB8_9CHLR
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EFH88820.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
putative mandelate racemase
PLM0_60_coex_redo_sep16_scaffold_439_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(2802..3815)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003702007
sugar ABC transporter periplasmic sugar-binding protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM0_60_coex_redo_sep16_scaffold_439_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3944..4804)
DNA (861bp) protein (287aa)
Aldo/keto reductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRN8_9CHLR
Aldo/keto reductase {ECO:0000313|EMBL:EFH85990.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
aldo/keto reductase
PLM0_60_coex_redo_sep16_scaffold_439_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4832..5797)
DNA (966bp) protein (322aa)
Inner-membrane translocator Tax=Thermincola potens (strain JR) RepID=D5XD96_THEPJ
inner-membrane translocator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_439_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5794..6900)
DNA (1107bp) protein (369aa)
ABC transporter permease; K02057 simple sugar transport system permease protein bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
abc transporter permease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_439_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6897..7295)
DNA (399bp) protein (133aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL98259.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM0_60_coex_redo_sep16_scaffold_439_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(7258..8337)
DNA (1080bp) protein (360aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS
putative ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_439_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8385..9470)
DNA (1086bp) protein (362aa)
Nucleoside-binding protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH38_MOOTA
basic membrane lipoprotein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_439_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9716..10036
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C922_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40315.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM0_60_coex_redo_sep16_scaffold_439_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10185..11267
DNA (1083bp) protein (361aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EEF59481.1}; EC=3.5.1.87 {ECO:0000313|EMBL:EEF59481.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Amidase, hydantoinase/carbamoylase family Tax=Pedosphaera parvula Ellin514 RepID=B9XKY7_9BACT
hydantase: amidase, hydantoinase/carbamoylase family
PLM0_60_coex_redo_sep16_scaffold_439_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11333..12586
DNA (1254bp) protein (418aa)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
dihydroorotase, multifunctional complex type (EC:3.5.2.5)
hypothetical protein Tax=Meiothermus timidus RepID=UPI00035C73DA
PLM0_60_coex_redo_sep16_scaffold_439_14
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12641..13210
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Streptomyces scabies (strain 87.22) RepID=C9YVP4_STRSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG67792.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM0_60_coex_redo_sep16_scaffold_439_15
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(13276..13842)
DNA (567bp) protein (189aa)
ankyrin bin=bin9_gal15 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
ankyrin
Tax=RBG_16_Chloroflexi_52_11_curated
PLM0_60_coex_redo_sep16_scaffold_439_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14420..15511
DNA (1092bp) protein (364aa)
dehydrogenase, oxidoreductase FAD flavoprotein (EC:1.6.99.3)
Putative dehydrogenase, oxidoreductase FAD flavoprotein Tax=alpha proteobacterium BAL199 RepID=A8TJR0_9PROT
Putative dehydrogenase, oxidoreductase FAD flavoprotein {ECO:0000313|EMBL:EDP66854.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM0_60_coex_redo_sep16_scaffold_439_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15518..16882)
DNA (1365bp) protein (455aa)
hydroxydechloroatrazine ethylaminohydrolase (EC:3.5.99.3)
Amidohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS78_RUBXD
Amidohydrolase {ECO:0000313|EMBL:ABG05750.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM0_60_coex_redo_sep16_scaffold_439_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16883..19144)
DNA (2262bp) protein (754aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
PLM0_60_coex_redo_sep16_scaffold_439_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19141..19608)
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAV5_GEOOG
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADB75990.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM0_60_coex_redo_sep16_scaffold_439_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19605..20432)
DNA (828bp) protein (276aa)
Molybdopterin dehydrogenase, FAD-binding protein Tax=Saccharopolyspora erythraea RepID=A4F964_SACEN
molybdopterin dehydrogenase, FAD-binding protein
Molybdopterin dehydrogenase, FAD-binding protein {ECO:0000313|EMBL:CAM00589.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM0_60_coex_redo_sep16_scaffold_439_21
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20481..21362)
DNA (882bp) protein (294aa)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
urate oxidase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026261F9
urate oxidase
PLM0_60_coex_redo_sep16_scaffold_439_22
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21359..21592)
DNA (234bp) protein (78aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
5-hydroxyisourate hydrolase Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X327_9NOCA
transthyretin
PLM0_60_coex_redo_sep16_scaffold_439_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21685..22137)
DNA (453bp) protein (151aa)
Allantoicase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZL4_FRADG
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
OHCU decarboxylase
PLM0_60_coex_redo_sep16_scaffold_439_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22130..23815)
DNA (1686bp) protein (562aa)
Adenine deaminase (EC:3.5.4.2)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B55181
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_439_25
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(23988..24902)
DNA (915bp) protein (305aa)
alpha/beta hydrolase (EC:3.8.1.5); K01563 haloalkane dehalogenase [EC:3.8.1.5] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
alpha/beta hydrolase fold family protein
Tax=CSP1_2_Dadabacteria
PLM0_60_coex_redo_sep16_scaffold_439_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

24940..25389
DNA (450bp) protein (150aa)
seg 9..22 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM0_60_coex_redo_sep16_scaffold_439_27
unknown

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25502..25612
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 27 items

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