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PLM0_60_coex_redo_sep16_scaffold_456

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_456_1
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..1858
DNA (1857bp) protein (619aa)
Probable ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDN45098.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDN45098.1};; Flags: Fragment;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
ATP-dependent DNA helicase RecQ Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D8B1_PAESJ
ATP-dependent DNA helicase
PLM0_60_coex_redo_sep16_scaffold_456_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1855..2598
DNA (744bp) protein (248aa)
Haloacid dehalogenase, type II Tax=Mycobacterium sp. (strain JLS) RepID=A3PSL9_MYCSJ
haloacid dehalogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM0_60_coex_redo_sep16_scaffold_456_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2595..2927)
DNA (333bp) protein (111aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UAH4_DEIML
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM0_60_coex_redo_sep16_scaffold_456_4
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2928..3512)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000378E0B0
NADPH:quinone reductase {ECO:0000313|EMBL:EWM64264.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
alcohol dehydrogenase zinc-binding domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_456_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3602..4984
DNA (1383bp) protein (461aa)
MFS transporter, metabolite:H+ symporter (MHS) family protein Tax=Afipia felis ATCC 53690 RepID=K8NGR9_AFIFE
MFS transporter, metabolite:H+ symporter (MHS) family protein {ECO:0000313|EMBL:EKS27619.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
sugar (and other) transporter family protein
PLM0_60_coex_redo_sep16_scaffold_456_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5058..5405)
DNA (348bp) protein (116aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037E89BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL21614.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
PLM0_60_coex_redo_sep16_scaffold_456_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5825..7636
DNA (1812bp) protein (604aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
ATP-dependent zinc metalloprotease FtsH Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0M8_9ACTO
ATP-dependent metalloprotease FtsH
PLM0_60_coex_redo_sep16_scaffold_456_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7677..7931
DNA (255bp) protein (85aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003742863
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44959.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM0_60_coex_redo_sep16_scaffold_456_9
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7938..8525
DNA (588bp) protein (196aa)
alpha/beta hydrolase Tax=Streptomyces chartreusis RepID=UPI000262F876
Alpha/beta hydrolase {ECO:0000313|EMBL:KDN79460.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
PLM0_60_coex_redo_sep16_scaffold_456_10
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8522..9385)
DNA (864bp) protein (288aa)
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08262.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
RNA polymerase sigma factor
PLM0_60_coex_redo_sep16_scaffold_456_11
RHI_OP11_Gottemanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

9461..9865
DNA (405bp) protein (135aa)
PhnB protein Tax=Streptomyces sp. AA4 RepID=D9UWW3_9ACTO
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_OP11_Gottemanbacteria_40_13_curated
PLM0_60_coex_redo_sep16_scaffold_456_12
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9862..11037)
DNA (1176bp) protein (392aa)
cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase Tax=Halobacterium sp. DL1 RepID=G4IBV4_9EURY
Tax=BJP_IG2157_Clostridiales_52_13
PLM0_60_coex_redo_sep16_scaffold_456_13
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..12482
DNA (1323bp) protein (441aa)
Xanthine permease Tax=Burkholderia vietnamiensis AU4i RepID=U2FTC7_BURVI
Xanthine permease {ECO:0000313|EMBL:ERJ33815.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative pyrimidine permease RutG
PLM0_60_coex_redo_sep16_scaffold_456_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..14000
DNA (1491bp) protein (497aa)
AMP-dependent synthetase and ligase Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FGW8_SACEN
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CAM03293.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM0_60_coex_redo_sep16_scaffold_456_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

14029..14811
DNA (783bp) protein (261aa)
Putative polyketide cyclase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN4_THERP
putative polyketide cyclase
Putative polyketide cyclase {ECO:0000313|EMBL:ACM05305.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM0_60_coex_redo_sep16_scaffold_456_16
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14808..15560
DNA (753bp) protein (251aa)
Molybdopterin dehydrogenase FAD-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin dehydrogenase FAD-binding protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
PLM0_60_coex_redo_sep16_scaffold_456_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15557..16012
DNA (456bp) protein (152aa)
Putative carbon monoxide dehydrogenase, small chain CutC Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3U3_STRRD
carbon monoxide dehydrogenase, small chain CutC
Putative carbon monoxide dehydrogenase, small chain CutC {ECO:0000313|EMBL:ACZ89378.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM0_60_coex_redo_sep16_scaffold_456_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16009..17877
DNA (1869bp) protein (623aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Saccharomonospora marina XMU15 RepID=H5X5G4_9PSEU
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EHR50036.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
xanthine dehydrogenase, molybdenum binding subunit apoprotein
Displaying 18 items

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