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PLM4_65_coex_sep16_scaffold_11333

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_11333_1
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..305)
DNA (303bp) protein (101aa)
Elongation factor Tu Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YES4_9BURK
tufA; GTPase, translation elongation factors
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
PLM4_65_coex_sep16_scaffold_11333_trna_3
unknown

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comp(354..426)
DNA (73bp)
transferRNA Thr
PLM4_65_coex_sep16_scaffold_11333_trna_2
unknown

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comp(470..540)
DNA (71bp)
transferRNA Gly
PLM4_65_coex_sep16_scaffold_11333_trna_1
unknown

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comp(593..675)
DNA (83bp)
transferRNA Tyr
PLM4_65_coex_sep16_scaffold_11333_2
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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888..1619
DNA (732bp) protein (244aa)
NAD-dependent epimerase/dehydratase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIM4_9CHRO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AFZ31507.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM4_65_coex_sep16_scaffold_11333_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1627..1992
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94078.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM4_65_coex_sep16_scaffold_11333_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2009..2530)
DNA (522bp) protein (174aa)
PilT domain-containing protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K940_NITWC
PilT domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_coex_sep16_scaffold_11333_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2508..2768)
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMY9_9GAMM
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_coex_sep16_scaffold_11333_6
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2862..3191
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BLY9_9GAMM
SpoVT/AbrB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EAR23327.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
PLM4_65_coex_sep16_scaffold_11333_7
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3193..3594
DNA (402bp) protein (134aa)
Ribonuclease VapC Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RWE4_ALLVD
PilT protein domain protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM4_65_coex_sep16_scaffold_11333_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3690..4010
DNA (321bp) protein (107aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Peptidyl-prolyl cis-trans isomerase Tax=Hydrocarboniphaga effusa AP103 RepID=I8I596_9GAMM
peptidylprolyl isomerase
PLM4_65_coex_sep16_scaffold_11333_9
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3968..4171
DNA (204bp) protein (68aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
peptidyl-prolyl cis-trans isomerase Tax=Perlucidibaca piscinae RepID=UPI0003B4E64C
FKBP-type peptidyl-prolyl cis-trans isomerase
PLM4_65_coex_sep16_scaffold_11333_10
unknown

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4134..4334
DNA (201bp) protein (67aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_11333_11
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4696..6450)
DNA (1755bp) protein (585aa)
Integrase, catalytic region Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZB4_MARAV
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABM18083.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 /; VT8).;"
Displaying 14 items

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