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PLM4_65_coex_sep16_scaffold_1124

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1124_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..729)
DNA (729bp) protein (243aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZEJ9_9GAMM
qseC; two-component system histidine kinase
PLM4_65_coex_sep16_scaffold_1124_2
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(726..1385)
DNA (660bp) protein (220aa)
Two-component system, OmpR family, response regulator Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DST9_9BURK
two-component system OmpR family response regulator
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:AFT87013.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
PLM4_65_coex_sep16_scaffold_1124_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1429..2559)
DNA (1131bp) protein (377aa)
Putative Ferric enterobactin esterase-related protein Tax=Tetrasphaera elongata Lp2 RepID=N0E2M8_9MICO
Putative esterase {ECO:0000313|EMBL:AKF03550.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
esterase
PLM4_65_coex_sep16_scaffold_1124_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2556..3485)
DNA (930bp) protein (310aa)
hypothetical protein Tax=Demetria terragena RepID=UPI0003758EDC
Uncharacterized protein {ECO:0000313|EMBL:AKF03549.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1124_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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3535..5673
DNA (2139bp) protein (713aa)
Gll1703 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJX8_GLOVI
peptidase
Gll1703 protein {ECO:0000313|EMBL:BAC89644.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM4_65_coex_sep16_scaffold_1124_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5963..6472)
DNA (510bp) protein (170aa)
Putative regulator of polymer accumulation protein Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCT5_XANAP
polyhydroxyalkanoate synthesis repressor PhaR
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:AJC45058.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
PLM4_65_coex_sep16_scaffold_1124_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6642..7586
DNA (945bp) protein (315aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cysteine synthase Tax=Dyella japonica RepID=UPI0002E137A4
cysteine synthase
PLM4_65_coex_sep16_scaffold_1124_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7583..8686
DNA (1104bp) protein (368aa)
Efflux transporter, RND family, MFP subunit Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMG3_THISH
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACL71795.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM4_65_coex_sep16_scaffold_1124_9

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9040..10473
DNA (1434bp) protein (478aa)
Thermostable carboxypeptidase 1 (Fragment) Tax=mine drainage metagenome RepID=T0Y0Q2_9ZZZZ
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:EQD28661.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
carboxypeptidase Taq
PLM4_65_coex_sep16_scaffold_1124_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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10513..11334
DNA (822bp) protein (274aa)
Nickel uptake transporter family protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPA8_SINAD
nickel uptake transporter family protein
Nickel uptake transporter family protein {ECO:0000313|EMBL:AGA30650.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_65_coex_sep16_scaffold_1124_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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11331..12137
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y823_NITMU
Uncharacterized protein {ECO:0000313|EMBL:CDH46891.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1124_12
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12137..13063
DNA (927bp) protein (309aa)
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI0003476E4B
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000313|EMBL:KIF13767.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
tRNA 2-thiocytidine biosynthesis protein TtcA
PLM4_65_coex_sep16_scaffold_1124_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13066..14592
DNA (1527bp) protein (509aa)
ADP-ribosylation/Crystallin J1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLH2_RHOMR
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:AEN74711.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM4_65_coex_sep16_scaffold_1124_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14833..15279
DNA (447bp) protein (149aa)
Response regulator receiver protein Tax=Haloterrigena limicola JCM 13563 RepID=M0CPH2_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELZ25165.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
response regulator receiver protein
PLM4_65_coex_sep16_scaffold_1124_15

Not on your lists

15381..16433
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BP57_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD71607.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1124_16
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16430..17452
DNA (1023bp) protein (341aa)
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase Tax=Rhodopirellula baltica RepID=F2AWG8_RHOBT
D-alanine-D-alanine ligase {ECO:0000313|EMBL:EGF25995.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
PLM4_65_coex_sep16_scaffold_1124_17
unknown

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17442..17708
DNA (267bp) protein (89aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1124_18
unknown

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17705..18082
DNA (378bp) protein (126aa)

This feature has no annotations

Displaying 18 items

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