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PLM4_65_coex_sep16_scaffold_2967

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2967_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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3..524
DNA (522bp) protein (174aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003647864
helicase c2
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM4_65_coex_sep16_scaffold_2967_2
unknown

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581..880
DNA (300bp) protein (100aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2967_3
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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881..1579
DNA (699bp) protein (233aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FBCB4
M22 family peptidase {ECO:0000313|EMBL:ETM67900.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_2967_4
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1787..2482
DNA (696bp) protein (232aa)
Two component transcriptional regulator PhoB, winged helix family Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E7P7_9GAMM
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) {ECO:0000313|EMBL:CDI03611.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
chemotaxis protein CheY
PLM4_65_coex_sep16_scaffold_2967_5
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2490..3866
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
histidine kinase (EC:2.7.13.3)
Histidine kinase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6Y4_9GAMM
PLM4_65_coex_sep16_scaffold_2967_6

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4018..4830
DNA (813bp) protein (271aa)
Metallophosphoesterase Tax=sediment metagenome RepID=D9PIW8_9ZZZZ
Metallophosphoesterase {ECO:0000313|EMBL:EFK96497.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
UDP-2,3-diacylglucosamine hydrolase-like protein
PLM4_65_coex_sep16_scaffold_2967_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4979..6022
DNA (1044bp) protein (348aa)
Glycosyl transferase group 1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWW4_NITHN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADE13845.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM4_65_coex_sep16_scaffold_2967_8
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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6072..6578
DNA (507bp) protein (169aa)
Protein-tyrosine phosphatase, low molecular weight Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUU7_NITHN
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:CDH44022.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
protein-tyrosine phosphatase, low molecular weight
PLM4_65_coex_sep16_scaffold_2967_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6671..7006
DNA (336bp) protein (112aa)
ArsR family transcriptional regulator Tax=Arenimonas oryziterrae RepID=UPI0003B36CC5
Arsenical resistance operon repressor {ECO:0000313|EMBL:KGQ20253.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
bacterial regulatory, arsR family protein
PLM4_65_coex_sep16_scaffold_2967_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7003..7482
DNA (480bp) protein (160aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE6_9GAMM
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AHX14580.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM4_65_coex_sep16_scaffold_2967_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7458..8147
DNA (690bp) protein (230aa)
hypothetical protein Tax=Dyella japonica RepID=UPI000305F58C
MIP family channel protein {ECO:0000313|EMBL:AKC87957.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
MIP family channel protein
PLM4_65_coex_sep16_scaffold_2967_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8237..8959
DNA (723bp) protein (241aa)
transcriptional regulator Tax=Singularimonas variicoloris RepID=UPI000372CEBC
transcriptional regulator PhoU
Tax=RBG_16_Gamma2_60_9_curated
PLM4_65_coex_sep16_scaffold_2967_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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8965..9459
DNA (495bp) protein (165aa)
Disulfide bond formation protein B Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVE4_PSEUU
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
disulfide bond formation protein DsbB
PLM4_65_coex_sep16_scaffold_2967_14
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9631..12009)
DNA (2379bp) protein (793aa)
Cation efflux system protein CusA Tax=Janthinobacterium sp. HH01 RepID=L9P9N0_9BURK
czcA; Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying 14 items

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