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PLM4_65_coex_sep16_scaffold_5675

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5675_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..239)
DNA (237bp) protein (79aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PIL6_9BACT
Tax=RBG_16_Gamma2_60_9_curated
PLM4_65_coex_sep16_scaffold_5675_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(302..895)
DNA (594bp) protein (198aa)
wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase WbpD (EC:2.3.1.-)
Transferase hexapeptide repeat containing protein Tax=Clostridium sp. DL-VIII RepID=G7MAQ5_9CLOT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_coex_sep16_scaffold_5675_3
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(912..2237)
DNA (1326bp) protein (442aa)
Amine oxidase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XKH3_9CHRO
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AFZ32177.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM4_65_coex_sep16_scaffold_5675_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(2308..3312)
DNA (1005bp) protein (335aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJE3_9CHRO
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KIF29033.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
PLM4_65_coex_sep16_scaffold_5675_5
RLO_PLX_64_10, Bacteria

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comp(3577..4644)
DNA (1068bp) protein (356aa)
glycosyltransferase (EC:2.4.1.-)
hypothetical protein Tax=Spirulina subsalsa RepID=UPI0003101850
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_coex_sep16_scaffold_5675_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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4852..6456
DNA (1605bp) protein (535aa)
Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTW4_ACCPU
Putative AMP-dependent synthetase and ligase, exosortase system type 1 associated {ECO:0000313|EMBL:CDH43680.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
acyl-CoA ligase
PLM4_65_coex_sep16_scaffold_5675_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6453..7658
DNA (1206bp) protein (402aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCU61832.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CCU61832.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Diaminopimelate decarboxylase Tax=Nitrosospira sp. APG3 RepID=M5DH96_9PROT
Orn/DAP/Arg decarboxylase 2
PLM4_65_coex_sep16_scaffold_5675_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7719..9077
DNA (1359bp) protein (453aa)
amidase (EC:3.5.1.4)
Amidase Tax=Achromobacter xylosoxidans C54 RepID=E5UBV0_ALCXX
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_coex_sep16_scaffold_5675_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9257..10759)
DNA (1503bp) protein (501aa)
Parallel beta-helix repeat bin=GWB2_Ignavibacteria_35_12 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
parallel beta-helix repeat-containing protein
Tax=RBG_16_Gamma2_60_9_curated
Displaying 9 items

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