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PLM4_65_coex_sep16_scaffold_14824

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_14824_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
Riboflavin synthase alpha chain protein Tax=Salinisphaera shabanensis E1L3A RepID=U2EIY8_9GAMM
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:GAN45801.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
riboflavin synthase subunit alpha
PLM4_65_coex_sep16_scaffold_14824_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(403..1476)
DNA (1074bp) protein (358aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000360A7B2
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
PLM4_65_coex_sep16_scaffold_14824_3

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comp(1503..2057)
DNA (555bp) protein (185aa)
Ribonucleotide reductase regulator NrdR-like protein Tax=mine drainage metagenome RepID=T1CBW7_9ZZZZ
Ribonucleotide reductase regulator NrdR-like protein {ECO:0000313|EMBL:EQD79762.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
PLM4_65_coex_sep16_scaffold_14824_4
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2085..3350)
DNA (1266bp) protein (422aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Serine hydroxymethyltransferase Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=GLYA_ALKEH
PLM4_65_coex_sep16_scaffold_14824_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3554..4126)
DNA (573bp) protein (191aa)
Histone deacetylase Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7M9_NITWC
histone deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying 5 items

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