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PLM3-1_170_b2_sep16_scaffold_4052

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4052_1
unknown

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comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4052_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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253..885
DNA (633bp) protein (211aa)
Thiamine pyrophosphokinase bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
thiamine pyrophosphokinase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b2_sep16_scaffold_4052_3
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(872..1663)
DNA (792bp) protein (264aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
Sensor histidine kinase Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JVW3_SYNJA
PLM3-1_170_b2_sep16_scaffold_4052_4
unknown

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comp(1612..2715)
DNA (1104bp) protein (368aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4052_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(2654..5383)
DNA (2730bp) protein (910aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-)
Peptidase M16 inactive domain protein bin=GWC2_Deltaproteobacteria_55_46 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3-1_170_b2_sep16_scaffold_4052_6
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

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comp(5725..8988)
DNA (3264bp) protein (1088aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003822517
Zn-dependent aminopeptidase
Tax=RBG_13_WOR_3_43_14_curated
PLM3-1_170_b2_sep16_scaffold_4052_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(9012..10211)
DNA (1200bp) protein (400aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH65_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
(Dimethylallyl)adenosine tRNA methylthiotransferase miaB
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4052_8
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10536..10949
DNA (414bp) protein (138aa)
Two component system sensor histidine kinase, hybrid Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NEM2_DESTT
two component system sensor histidine kinase, hybrid
Tax=CG_Syntroph_01
PLM3-1_170_b2_sep16_scaffold_4052_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11015..12223)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DB70_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16348.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_4052_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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12265..14049
DNA (1785bp) protein (595aa)
Replicative DNA helicase bin=GWC2_Methylomirabilis_70_16 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
replicative DNA helicase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_4052_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14054..14584
DNA (531bp) protein (177aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:CAN98760.1}; EC=3.4.21.26 {ECO:0000313|EMBL:CAN98760.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Prolyl oligopeptidase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZJ8_SORC5
PLM3-1_170_b2_sep16_scaffold_4052_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14601..15218
DNA (618bp) protein (206aa)
Peptidase S9 Tax=Sorangium cellulosum So0157-2 RepID=S4XKD3_SORCE
peptidase S9
Peptidase S9 {ECO:0000313|EMBL:AGP32926.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 12 items

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