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PLM3-1_170_b2_sep16_scaffold_4393

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4393_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(188..1018)
DNA (831bp) protein (277aa)
MazG family protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXU5_PARL1
MazG family protein
MazG family protein {ECO:0000313|EMBL:ABS64728.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3-1_170_b2_sep16_scaffold_4393_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1110..2411
DNA (1302bp) protein (434aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4393_3
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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2420..2677
DNA (258bp) protein (86aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
ATP-dependent DNA helicase Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWT9_9ACTN
DNA helicase II
PLM3-1_170_b2_sep16_scaffold_4393_4
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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2679..3080
DNA (402bp) protein (134aa)
cdd; Cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:CCC82524.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CCC82524.1};; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra; 1).;"
Cytidine deaminase Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RLS9_THETK
PLM3-1_170_b2_sep16_scaffold_4393_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3080..4375
DNA (1296bp) protein (432aa)
Pyrimidine-nucleoside phosphorylase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCR6_ANASK
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ACG71890.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3-1_170_b2_sep16_scaffold_4393_6
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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4372..5112
DNA (741bp) protein (247aa)
GCN5-related N-acetyltransferase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGA7_ANASK
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3-1_170_b2_sep16_scaffold_4393_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5147..7147)
DNA (2001bp) protein (667aa)
Multimodular transpeptidase-transglycosylase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
penicillin-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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