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PLM3-1_170_b2_sep16_scaffold_2242

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2242_1

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1..519
DNA (519bp) protein (173aa)
Marine sediment metagenome DNA, contig: S03H2_L07777 {ECO:0000313|EMBL:GAH31549.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Peptidase M1 membrane alanine aminopeptidase bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2242_2
unknown

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comp(802..1851)
DNA (1050bp) protein (350aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_3
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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2578..5274
DNA (2697bp) protein (899aa)
Protein kinase/protein beta WD-40 repeat bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3-1_170_b2_sep16_scaffold_2242_4
unknown

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comp(5474..6118)
DNA (645bp) protein (215aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_5
unknown

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6663..7025
DNA (363bp) protein (121aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_6
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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comp(7399..8394)
DNA (996bp) protein (332aa)
Na+/proline symporter Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKE8_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Na+/proline symporter
Tax=RBG_16_Caldithrix_48_16_curated
PLM3-1_170_b2_sep16_scaffold_2242_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8882..11533)
DNA (2652bp) protein (884aa)
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
TonB-dependent receptor plug
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2242_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(12838..13956)
DNA (1119bp) protein (373aa)
Putative 2-nitropropane dioxygenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML20_9BACT
2-nitropropane dioxygenase
Putative 2-nitropropane dioxygenase {ECO:0000313|EMBL:CBE69862.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2242_9
unknown

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comp(14260..14436)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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14771..15319
DNA (549bp) protein (183aa)
RNA polymerase sigma factor Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BFY6_MYCCN
rpoE; RNA polymerase, sigma subunit, ECF family
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3-1_170_b2_sep16_scaffold_2242_11
unknown

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15454..16059
DNA (606bp) protein (202aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_12
RLO_PLX_64_10, Bacteria

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16094..16495
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BMQ9_9BACT
transglutaminase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_2242_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16707..18941
DNA (2235bp) protein (745aa)
Putative uncharacterized protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QA78_DESAH
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b2_sep16_scaffold_2242_14
unknown

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19095..19613
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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19616..21307
DNA (1692bp) protein (564aa)
Protease-like protein Tax=Janthinobacterium sp. HH01 RepID=L9PBV0_9BURK bin=16ft_combo_ws3_JS1 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protease-associated PA domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2242_16
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21476..22282
DNA (807bp) protein (269aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI00036DC000
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3-1_170_b2_sep16_scaffold_2242_17
unknown

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22524..22898
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2242_18
unknown

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comp(22954..23163)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 18 items

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