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PLM3-1_170_b2_sep16_scaffold_234

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_234_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1..333
DNA (333bp) protein (111aa)
Amino acid-binding ACT bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b2_sep16_scaffold_234_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(450..1940)
DNA (1491bp) protein (497aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dinucleotide-utilizing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_234_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(1931..2350)
DNA (420bp) protein (140aa)
Mov34/MPN/PAD-1 family protein Tax=Rhodothermus marinus RepID=D0MJA6_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b2_sep16_scaffold_234_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2347..3426)
DNA (1080bp) protein (360aa)
cysteine synthase-like protein (EC:2.5.1.47)
Cysteine synthases Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY14_RUBXD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b2_sep16_scaffold_234_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3691..4041)
DNA (351bp) protein (117aa)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI00035D0A05
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b2_sep16_scaffold_234_6
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

4237..4632
DNA (396bp) protein (132aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PE0_SOLUE
serine/threonine protein kinase
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3-1_170_b2_sep16_scaffold_234_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4632..5546
DNA (915bp) protein (305aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ86696.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b2_sep16_scaffold_234_8
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5746..7455)
DNA (1710bp) protein (570aa)
Potassium efflux system KefA protein Tax=Agarivorans albus MKT 106 RepID=R9PGK4_AGAAL
Potassium efflux system KefA protein {ECO:0000313|EMBL:GAD00477.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
transporter small conductance mechanosensitive ion channel family protein
PLM3-1_170_b2_sep16_scaffold_234_9
unknown

Not on your lists

7714..8400
DNA (687bp) protein (229aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_234_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8497..10728)
DNA (2232bp) protein (744aa)
Serine/threonine protein kinase with TPR repeats bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_234_11
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11065..11196
DNA (132bp) protein (44aa)
hypothetical protein bin=bin5_DeltaP species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM3-1_170_b2_sep16_scaffold_234_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11428..14385
DNA (2958bp) protein (986aa)
serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein Tax=Mycobacterium sp. 141 RepID=UPI00037E441F
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3-1_170_b2_sep16_scaffold_234_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14537..15307
DNA (771bp) protein (257aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_234_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15300..16184
DNA (885bp) protein (295aa)
Hypothetical cytosolic protein bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_234_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16938..17846
DNA (909bp) protein (303aa)
Methyltransferase type 11 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D49_RHOPS
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABE37990.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3-1_170_b2_sep16_scaffold_234_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17843..20230
DNA (2388bp) protein (796aa)
type 11 methyltransferase Tax=Ruegeria conchae RepID=UPI0002379A16
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b2_sep16_scaffold_234_17
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20227..21507
DNA (1281bp) protein (427aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_55_46 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
glycosyltransferase
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM3-1_170_b2_sep16_scaffold_234_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21699..22496
DNA (798bp) protein (266aa)
O-antigen export system permease protein RfbD Tax=Cystobacter fuscus DSM 2262 RepID=S9NYU1_9DELT
rfbA1; o-antigen ABC exporter, permease
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM3-1_170_b2_sep16_scaffold_234_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

22501..23316
DNA (816bp) protein (272aa)
O-antigen ABC exporter, ATP-binding protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FDR8_STIAD
o-antigen ABC exporter, ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_234_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23313..24446)
DNA (1134bp) protein (378aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8Z2_SORC5
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3-1_170_b2_sep16_scaffold_234_21
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24443..25258)
DNA (816bp) protein (272aa)
glycosyl transferase family 2 bin=CD_OP8_4m species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative glycosyltransferase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3-1_170_b2_sep16_scaffold_234_22
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25545..28196)
DNA (2652bp) protein (884aa)
Multicopper oxidase type 3 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RAY6_KANKD
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:ACV26428.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
PLM3-1_170_b2_sep16_scaffold_234_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

28885..29088
DNA (204bp) protein (68aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b2_sep16_scaffold_234_24
unknown

Not on your lists

29268..29774
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_234_25
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

29914..30774
DNA (861bp) protein (287aa)
UPI0003D1A86A related cluster Tax=unknown RepID=UPI0003D1A86A
Peptidase S8 and S53, subtilisin, kexin, sedolisin
Tax=RBG_16_Zixibacteria_53_22_curated
Displaying 25 items

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