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PLM3-1_170_b2_sep16_scaffold_1289

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1289_1
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

1..408
DNA (408bp) protein (136aa)
TPR repeat-containing serine/threonin protein kinase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3-1_170_b2_sep16_scaffold_1289_2
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

383..586
DNA (204bp) protein (68aa)
Phage shock protein C, PspC Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI11_RHOMR
phage shock protein PspC
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b2_sep16_scaffold_1289_3
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

635..1861
DNA (1227bp) protein (409aa)
Putative uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3-1_170_b2_sep16_scaffold_1289_4
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1858..2373)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029AFDD3
Uncharacterized protein {ECO:0000313|EMBL:GAN31968.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1289_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2407..3207)
DNA (801bp) protein (267aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_1289_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

3365..4456
DNA (1092bp) protein (364aa)
Tax=GWC2_Nitrospirae_57_9_curated
PLM3-1_170_b2_sep16_scaffold_1289_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4813..5082)
DNA (270bp) protein (90aa)
Cold-shock DNA-binding domain protein Tax=Anaeromyxobacter RepID=B4UH01_ANASK bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cold-shock DNA-binding protein family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1289_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5273..6235)
DNA (963bp) protein (321aa)
PREDICTED: serine racemase-like isoform X3 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b2_sep16_scaffold_1289_9
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6222..7235)
DNA (1014bp) protein (338aa)
Ornithine cyclodeaminase/mu-crystallin Tax=Desulfococcus multivorans DSM 2059 RepID=S7U718_DESML
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EPR44920.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1289_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7240..7533)
DNA (294bp) protein (98aa)
id=5223456 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1289_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7663..8004
DNA (342bp) protein (114aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQU8_SYNAS
cytoplasmic protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM3-1_170_b2_sep16_scaffold_1289_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8009..10096
DNA (2088bp) protein (696aa)
Uncharacterized protein Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNM1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50440.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1289_13
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10110..12806)
DNA (2697bp) protein (899aa)
tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase bin=GWF2_Bacteroidetes_38_335 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
PLM3-1_170_b2_sep16_scaffold_1289_14
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

13130..13489
DNA (360bp) protein (120aa)
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3-1_170_b2_sep16_scaffold_1289_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13535..14908
DNA (1374bp) protein (458aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3-1_170_b2_sep16_scaffold_1289_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14905..15228)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XP40_9BACT
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1289_17
unknown

Not on your lists

15321..15800
DNA (480bp) protein (160aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1289_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15840..16670
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACZ1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40368.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying 18 items

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