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PLM3-1_170_b2_sep16_scaffold_1838

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1838_1
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..762
DNA (762bp) protein (254aa)
HAD-superfamily subfamily IIA hydrolase like protein Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELH5_METSB
Uncharacterized protein {ECO:0000313|EMBL:KGB80736.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
HAD-superfamily subfamily IIA hydrolase, hypothetical 2
PLM3-1_170_b2_sep16_scaffold_1838_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

857..2467
DNA (1611bp) protein (537aa)
Putative alternative thymidylate synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD9_CHLTF
putative alternative thymidylate synthase
Tax=CG_Arma_02
PLM3-1_170_b2_sep16_scaffold_1838_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(2486..3040)
DNA (555bp) protein (185aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM3-1_170_b2_sep16_scaffold_1838_4
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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comp(3164..4345)
DNA (1182bp) protein (394aa)
Major facilitator superfamily MFS_1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIR5_THEM7
major facilitator superfamily protein
Tax=RBG_13_Lokiarchaeota_45_8_curated
PLM3-1_170_b2_sep16_scaffold_1838_5
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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4364..5482
DNA (1119bp) protein (373aa)
Lipoprotein Tax=Thermotoga thermarum DSM 5069 RepID=F7YWG6_9THEM
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEH51945.1}; Flags: Precursor;; species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga thermarum DSM 5069.;"
PLM3-1_170_b2_sep16_scaffold_1838_6
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5538..7064
DNA (1527bp) protein (509aa)
ABC transporter-like protein Tax=Acetonema longum DSM 6540 RepID=F7NHQ4_9FIRM
ABC transporter-like protein {ECO:0000313|EMBL:EGO64429.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
CUT2 family monosaccharide ABC transporter ATP-binding protein
PLM3-1_170_b2_sep16_scaffold_1838_7
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

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7081..8112
DNA (1032bp) protein (344aa)
Monosaccharide ABC transporter membrane protein, CUT2 family Tax=Thermotoga thermarum DSM 5069 RepID=F7YWG9_9THEM
CUT2 family monosaccharide ABC transporter membrane protein
Tax=MPF_Thermotogae_50_1627
PLM3-1_170_b2_sep16_scaffold_1838_8
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

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8117..9184
DNA (1068bp) protein (356aa)
Inner-membrane translocator Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8K6_THELD
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AER67467.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
PLM3-1_170_b2_sep16_scaffold_1838_9
CSP1_5_NC10, NC10, Bacteria

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9181..10992
DNA (1812bp) protein (604aa)
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
glgP; glycogen phosphorylase (EC:2.4.1.1)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1838_10
CSP1_5_NC10, NC10, Bacteria

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10989..11333
DNA (345bp) protein (115aa)
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
alpha-glucan phosphorylase (EC:2.4.1.1)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1838_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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11334..12083
DNA (750bp) protein (250aa)
putative stress adaptation transporter bin=CNBR_ACIDO species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
YkoY family integral membrane protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b2_sep16_scaffold_1838_12
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

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12080..14560
DNA (2481bp) protein (827aa)
Periplasmic serine protease Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANY5_IGNAJ
periplasmic serine protease
Tax=RBG_13_WOR_3_43_14_curated
PLM3-1_170_b2_sep16_scaffold_1838_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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14613..16847
DNA (2235bp) protein (745aa)
Serine phosphatase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S47_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
serine phosphatase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1838_14
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16909..17367
DNA (459bp) protein (153aa)
Serine-protein kinase
Putative anti-sigma F factor bin=GWC2_Ignavibacteria_56_12 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=GWA2_Bacteroidetes_30_7_curated
PLM3-1_170_b2_sep16_scaffold_1838_15
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17351..18547)
DNA (1197bp) protein (399aa)
Metal dependent phosphohydrolase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2I2_DESAP
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACA59213.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
PLM3-1_170_b2_sep16_scaffold_1838_16
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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comp(18668..19408)
DNA (741bp) protein (247aa)
Cytochrome c biogenesis protein CcdA bin=GWF2_Nitrospirae_44_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cytochrome c biogenesis protein transmembrane protein
Tax=GWF2_Nitrospirae_44_13_curated
PLM3-1_170_b2_sep16_scaffold_1838_17
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(19433..19822)
DNA (390bp) protein (130aa)
thiol-disulfide oxidoreductase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B637BF
Redoxin domain protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3-1_170_b2_sep16_scaffold_1838_18
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19977..21308)
DNA (1332bp) protein (444aa)
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b2_sep16_scaffold_1838_19
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21592..21984)
DNA (393bp) protein (131aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_02
Displaying 19 items

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