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PLM3-1_170_b2_sep16_scaffold_3989

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3989_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114..1154
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Calothrix sp. PCC 7507 RepID=K9PEZ5_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_3989_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1739..2185
DNA (447bp) protein (149aa)
cupin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_3
unknown

Not on your lists

2182..2343
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3989_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3023..4030)
DNA (1008bp) protein (336aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4867..5625)
DNA (759bp) protein (253aa)
Carboxymethylenebutenolidase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carboxymethylenebutenolidase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_3989_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5781..6812
DNA (1032bp) protein (344aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7197..8753
DNA (1557bp) protein (519aa)
Beta-lactamase domain protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NI5_STIAD
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_3989_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9119..9652
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=haloarchaeon 3A1_DGR RepID=T0STT8_9EURY
Cation/multidrug efflux pump
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..12104)
DNA (2319bp) protein (773aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
carbon monoxide dehydrogenase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12242..13246)
DNA (1005bp) protein (335aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_11
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

13347..13664
DNA (318bp) protein (106aa)
DNA polymerase beta domain protein region Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZWB1_THEET
DNA polymerase beta domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
PLM3-1_170_b2_sep16_scaffold_3989_12
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

13756..14067
DNA (312bp) protein (104aa)
HEPN domain-containing protein bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
HEPN domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
PLM3-1_170_b2_sep16_scaffold_3989_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14201..15181)
DNA (981bp) protein (327aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3989_14
unknown

Not on your lists

comp(15269..15928)
DNA (660bp) protein (220aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3989_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16185..16295)
DNA (111bp) protein (37aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 15 items

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