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PLM3-1_170_b2_sep16_scaffold_2371

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2371_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..427)
DNA (426bp) protein (142aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(514..963)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBX8_THIV6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1002..2057)
DNA (1056bp) protein (352aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2371_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2146..2550)
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2901..4262)
DNA (1362bp) protein (454aa)
Putative two-component, sigma54 specific, transcriptional regulator, Fis family Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLX8_DESAA
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4406..4819)
DNA (414bp) protein (138aa)
hypothetical protein Tax=Endozoicomonas elysicola RepID=UPI00036207A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD05618.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3-1_170_b2_sep16_scaffold_2371_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5048..5683)
DNA (636bp) protein (212aa)
isochorismatase Tax=Pusillimonas noertemannii RepID=UPI0002F725F7
yecD; Isochorismatase family protein yecD
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2371_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(5853..7433)
DNA (1581bp) protein (527aa)
FAD dependent oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS78_KORVE
FAD dependent oxidoreductase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b2_sep16_scaffold_2371_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7440..8987)
DNA (1548bp) protein (516aa)
FAD dependent oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS78_KORVE
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2371_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9181..10353
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000382EFE5
glycine cleavage T protein (aminomethyl transferase)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10386..11147)
DNA (762bp) protein (254aa)
imidazole glycerol phosphate synthase
Imidazole glycerol phosphate synthase subunit HisF bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2371_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11599..12018
DNA (420bp) protein (140aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_13
unknown

Not on your lists

12006..13007
DNA (1002bp) protein (334aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_14
unknown

Not on your lists

comp(13437..13556)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13678..14322)
DNA (645bp) protein (215aa)
id=2090298 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2371_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14540..15208
DNA (669bp) protein (223aa)
Restriction endonuclease bin=GWD2_Deltaproteobacteria_55_8 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TPR Domain containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2371_17
unknown

Not on your lists

comp(15113..15295)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15493..16446)
DNA (954bp) protein (318aa)
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2371_19
unknown

Not on your lists

comp(16499..16810)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17204..18583)
DNA (1380bp) protein (460aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase bin=GWD2_Deltaproteobacteria_55_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2371_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18728..20752
DNA (2025bp) protein (675aa)
hypothetical protein SpalD1_18615 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2371_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20806..22722
DNA (1917bp) protein (639aa)
hypothetical protein SpalD1_18615 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2371_23
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22810..24861
DNA (2052bp) protein (684aa)
Uncharacterized protein Tax=uncultured bacterium RepID=L7Y6P1_9BACT
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2371_24
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

24955..25701
DNA (747bp) protein (249aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036375A1
dolichol-P-glucose synthetase
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
PLM3-1_170_b2_sep16_scaffold_2371_25
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(25698..26519)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037F744A
zinc/iron ABC transporter permease
Tax=GWF2_Planctomycetes_40_8_curated
PLM3-1_170_b2_sep16_scaffold_2371_26
unknown

Not on your lists

comp(26777..27046)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_27
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(27246..27992)
DNA (747bp) protein (249aa)
putative nucleotidyl transferase (EC:2.7.7.-)
Putative Nucleotidyl transferase Tax=Candidatus Nitrospira defluvii RepID=D8PII7_9BACT
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM3-1_170_b2_sep16_scaffold_2371_28
unknown

Not on your lists

comp(27989..28222)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2371_29
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28219..29295)
DNA (1077bp) protein (359aa)
putative phosphotransferase (EC:2.7.1.-)
Putative Phosphotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PII8_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2371_30
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29762..30724
DNA (963bp) protein (321aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying items 1-30 of 31 in total

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